RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ARHGEF18Q6ZSZ5 1173 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 DCLK2Q8N568 766 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 TRIM11Q96F44 468 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 AASSQ9UDR5 926 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 CLIP2Q9UDT6 1046 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 C19orf53Q9UNZ5 99 aaPredicted RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC66A2RUB6 948 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 A6NLC8 198 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 UPK3BL1B0FP48 263 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 UPK3BL2E5RIL1 263 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 TLR3O15455 904 aaKnown RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 AP1G1O43747 822 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 ZBED4O75132 1171 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 SASH1O94885 1247 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 SNX4O95219 450 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 ZBED1O96006 694 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 MTHFRP42898 656 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 KRTCAP3Q53RY4 240 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 LRRC47Q8N1G4 583 aaKnown RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 FBXO27Q8NI29 283 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 CNDP1Q96KN2 507 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 NUP88Q99567 741 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 TREX2Q9BQ50 279 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 TXLNGYQ9BZA5 131 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC68Q9H2F9 335 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 ZHX1Q9UKY1 873 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 BOLA1Q9Y3E2 137 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 A0A087WV62 115 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 H0YC42 278 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 STAM2O75886 525 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 DHRS4L1P0CG22 281 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 BPIP17213 487 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 HSPA1LP34931 641 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 TUBP50607 506 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 EPHA4P54764 986 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 SESN3P58005 492 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 ERVK-21P61565 698 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 ZNF362Q5T0B9 420 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 IFIT1BQ5T764 474 aaKnown RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 KIAA1211Q6ZU35 1233 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 C3orf58Q8NDZ4 430 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 KIAA1524Q8TCG1 905 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 NTPCRQ9BSD7 190 aaKnown RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 SIL1Q9H173 461 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 XAB2Q9HCS7 855 aaKnown RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 TCF7L2Q9NQB0 619 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 RTEL1Q9NZ71 1219 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 ZNF624Q9P2J8 865 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
PDGFRA-206ENST00000508170 CUX2O14529 1486 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC69A6NI79 296 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 BTBD11A6QL63 1104 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 M0R2C6 588 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 SGSM2O43147 1006 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 ZBTB43O43298 467 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 NEMFO60524 1076 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 TADA3O75528 432 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 POU2F2P09086 479 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 HSPA6P17066 643 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 ATP4AP20648 1035 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 PBLDP30039 288 aaPredicted RBP8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 GSTT1P30711 240 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 ACTN2P35609 894 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 OASLQ15646 514 aaKnown RBP8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 ANO4Q32M45 955 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 C5orf22Q49AR2 442 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 FAM117BQ6P1L5 589 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 POMZP3Q6PJE2 187 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 RUFY4Q6ZNE9 571 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 RUFY3Q7L099 469 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 NUP54Q7Z3B4 507 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 RALYLQ86SE5 291 aaKnown RBP8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 CFAP36Q96G28 342 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 FSD1Q9BTV5 496 aa8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 OLA1Q9NTK5 396 aaKnown RBP8.4□□□□□ -1.06
PDGFRA-206ENST00000508170 NDC80O14777 642 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 FBXO24O75426 580 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 HTRA3P83110 453 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 YOD1Q5VVQ6 348 aaPredicted RBP8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 CCDC91Q7Z6B0 441 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 IL17RDQ8NFM7 739 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 SPATA17Q96L03 361 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 ACAD9Q9H845 621 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 VTA1Q9NP79 307 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 APOBEC2Q9Y235 224 aaKnown RBP8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 ZNF711Q9Y462 761 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 NESP48681 1621 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 EEF2P13639 858 aaKnown RBP8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 NLRP5P59047 1200 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 IQSEC1Q6DN90 963 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 LRRC71Q8N4P6 559 aa8.39□□□□□ -1.07
PDGFRA-206ENST00000508170 ZBTB34Q8NCN2 500 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms