RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 MAMDC4Q6UXC1 1216 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 RNF180Q86T96 592 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 CCDC144CPQ8IYA2 1237 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 PRPF38AQ8NAV1 312 aaKnown RBP7.73□□□□□ -1.17
NEDD4-206ENST00000507063 GALNT6Q8NCL4 622 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 APPBP2Q92624 585 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 MKL1Q969V6 931 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 DDX11Q96FC9 970 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 TEX13BQ9BXU2 312 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 SLC38A10Q9HBR0 1119 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 TMEM39AQ9NV64 488 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 MTMR4Q9NYA4 1195 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 DIS3Q9Y2L1 958 aaKnown RBP7.73□□□□□ -1.17
NEDD4-206ENST00000507063 MYH7P12883 1935 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 ZNF536O15090 1300 aa7.73□□□□□ -1.17
NEDD4-206ENST00000507063 ROBO3Q96MS0 1386 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 CUL9Q8IWT3 2517 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 KIAA0355O15063 1070 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ZBED4O75132 1171 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ASGR1P07306 291 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ACRP10323 421 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 AKR1A1P14550 325 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 RAG1P15918 1043 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 RNF144AP50876 292 aaPredicted RBP7.72□□□□□ -1.17
NEDD4-206ENST00000507063 TFAP4Q01664 338 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 GRIN2CQ14957 1233 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 CCDC144BQ3MJ40 725 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 SLFN13Q68D06 897 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 KCTD1Q719H9 257 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ANKRD33Q7Z3H0 272 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ZNF444Q8N0Y2 327 aaPredicted RBP7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 MAFAQ8NHW3 353 aaPredicted RBP7.72□□□□□ -1.17
NEDD4-206ENST00000507063 PI4K2BQ8TCG2 481 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 RNPC3Q96LT9 517 aaKnown RBP7.72□□□□□ -1.17
NEDD4-206ENST00000507063 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.72□□□□□ -1.17
NEDD4-206ENST00000507063 KATNBL1Q9H079 304 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 PRDM6Q9NQX0 595 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 STARD7Q9NQZ5 370 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 IL17RBQ9NRM6 502 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 NRBP1Q9UHY1 535 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 FAM184BQ9ULE4 1060 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 MTMR7Q9Y216 660 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 CNPY2Q9Y2B0 182 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 ASTN1O14525 1302 aa7.72□□□□□ -1.17
NEDD4-206ENST00000507063 TMEM232C9JQI7 657 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 ATP2A1O14983 1001 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 DUSP11O75319 330 aaKnown RBP7.71□□□□□ -1.18
NEDD4-206ENST00000507063 TTLL1O95922 423 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 TIMP1P01033 207 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 C6orf222P0C671 652 aaPredicted RBP7.71□□□□□ -1.18
NEDD4-206ENST00000507063 BMP3P12645 472 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 CSF2RAP15509 400 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 MCCP23508 829 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 GPC1P35052 558 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 ABL2P42684 1182 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 CDK7P50613 346 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 SMAD3P84022 425 aaKnown RBP7.71□□□□□ -1.18
NEDD4-206ENST00000507063 FPGSQ05932 587 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 VAC14Q08AM6 782 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 GAS6Q14393 721 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 PLA2G4EQ3MJ16 856 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 MUM1L1Q5H9M0 696 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 VPS53Q5VIR6 699 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 GIMAP6Q6P9H5 292 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 RIPOR1Q6ZS17 1223 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 ARMCX2Q7L311 632 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 USP38Q8NB14 1042 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 PPP1R13LQ8WUF5 828 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 VTI1AQ96AJ9 217 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 ZNF837Q96EG3 531 aaPredicted RBP7.71□□□□□ -1.18
NEDD4-206ENST00000507063 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 PDGFCQ9NRA1 345 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 FEM1BQ9UK73 627 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 TBX21Q9UL17 535 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 ISY1Q9ULR0 285 aaKnown RBP7.71□□□□□ -1.18
NEDD4-206ENST00000507063 UMODL1Q5DID0 1318 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 SYNGAP1Q96PV0 1343 aa7.71□□□□□ -1.18
NEDD4-206ENST00000507063 DCDC2CA8MYV0 355 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 TSPY3P0CV98 308 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 TSPY8P0CW00 308 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 CYP2C18P33260 490 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 GJA9P57773 515 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 PPARAQ07869 468 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 GNASQ5JWF2 1037 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 TMEM240Q5SV17 173 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 ZMYM1Q5SVZ6 1142 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 TTBK2Q6IQ55 1244 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 CCDC174Q6PII3 467 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 EEPD1Q7L9B9 569 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 FAM133AQ8N9E0 248 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 GMCL1P1Q8NEA9 526 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 TOX2Q96NM4 488 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 PPP1R12CQ9BZL4 782 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 ABHD16BQ9H3Z7 469 aa7.7□□□□□ -1.18
NEDD4-206ENST00000507063 A1CFQ9NQ94 594 aaKnown RBP7.7□□□□□ -1.18
NEDD4-206ENST00000507063 CXXC1Q9P0U4 656 aaPredicted RBP7.7□□□□□ -1.18
NEDD4-206ENST00000507063 CTDP1Q9Y5B0 961 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms