RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
HMGCS1-203ENST00000507004 FIBPO43427 364 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 EFCAB14O75071 495 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 RGS20O76081 388 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 GGPS1O95749 300 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 SELPP16109 830 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 ATP2A2P16615 1042 aaKnown RBP16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 CHMP4BP1P59074 171 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 PTK7Q13308 1070 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 KRT32Q14532 448 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 MFSD10Q14728 455 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 SLC35G1Q2M3R5 365 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 SGMS1Q86VZ5 419 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 CDHR1Q96JP9 859 aa16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
HMGCS1-203ENST00000507004 GRXCR1A8MXD5 290 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 NOP56O00567 594 aaKnown RBP16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 UBA1P22314 1058 aaKnown RBP16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 KIAA0753Q2KHM9 967 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 PCNX4Q63HM2 1172 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 METTL7BQ6UX53 244 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 USP26Q9BXU7 913 aa16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
HMGCS1-203ENST00000507004 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 PBX2P40425 430 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 TSGA10IPQ3SY00 556 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 LRRC8DQ7L1W4 858 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 SYMPKQ92797 1274 aaKnown RBP16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 EHMT1Q9H9B1 1298 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 MYO9BQ13459 2157 aa16.61■□□□□ 0.25
HMGCS1-203ENST00000507004 SPATA31C2B4DYI2 1134 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 MAFGO15525 162 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 CAND2O75155 1236 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 CDC45O75419 566 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 GNAT1P11488 350 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 KCNJ6P48051 423 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 RCAN1P53805 252 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 HSDL1Q3SXM5 330 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 IL31RAQ8NI17 732 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 NKX2-4Q9H2Z4 354 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 EMSYQ7Z589 1322 aa16.6■□□□□ 0.25
HMGCS1-203ENST00000507004 TANC1Q9C0D5 1861 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 ABHD14A-ACY1A0A1B0GW23 586 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 H3BRB1 525 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 hCG_1984214I3L0E3 225 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 CNKSR3Q6P9H4 555 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 SRBD1Q8N5C6 995 aaKnown RBP16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 ZNF713Q8N859 430 aaPredicted RBP16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 VWCEQ96DN2 955 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
HMGCS1-203ENST00000507004 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.25
HMGCS1-203ENST00000507004 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 MEIS2O14770 477 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 CXCL10P02778 98 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 ZNF286BP0CG31 522 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 CKBP12277 381 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 MRPS9P82933 396 aaKnown RBP16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 PIBF1Q8WXW3 757 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 C16orf70Q9BSU1 422 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 PRDM12Q9H4Q4 367 aa16.58■□□□□ 0.24
HMGCS1-203ENST00000507004 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 LGALS2P05162 132 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 SP2Q02086 613 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 USP17L6PQ6QN14 398 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 MICU3Q86XE3 530 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 HERC6Q8IVU3 1022 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 TNPO1Q92973 898 aaKnown RBP16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 YBX2Q9Y2T7 364 aaKnown RBP16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 COL6A3P12111 3177 aa16.57■□□□□ 0.24
HMGCS1-203ENST00000507004 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 ZBTB43O43298 467 aa16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 RPLP2P05387 115 aaKnown RBP16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 IKBKEQ14164 716 aa16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 APOA5Q6Q788 366 aa16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 SERINC5Q86VE9 423 aa16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 DHX38Q92620 1227 aaKnown RBP16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 GPR20Q99678 358 aa16.56■□□□□ 0.24
HMGCS1-203ENST00000507004 RTEL1Q9NZ71 1219 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms