RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
PDGFC-205ENST00000506880 GNEQ9Y223 722 aaKnown RBP9.63□□□□□ -0.87
PDGFC-205ENST00000506880 ELP1O95163 1332 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 MROH7Q68CQ1 1323 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 A6NJR5 290 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 H3BQV1 296 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 SLC26A4O43511 780 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 PEX10O60683 326 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 PPFIA4O75335 1185 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 EIF2AK2P19525 551 aaKnown RBP9.62□□□□□ -0.87
PDGFC-205ENST00000506880 GJB2P29033 226 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 HOXA13P31271 388 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-205ENST00000506880 CYP2C19P33261 490 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 MTMR1Q13613 665 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 CCL14Q16627 93 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-205ENST00000506880 LHX8Q68G74 356 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
PDGFC-205ENST00000506880 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 PPTC7Q8NI37 304 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 TNFRSF25Q93038 417 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 KATNAL1Q9BW62 490 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 WDR81Q562E7 1941 aa9.62□□□□□ -0.87
PDGFC-205ENST00000506880 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 DKC1O60832 514 aaKnown RBP eCLIP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 BAG4O95429 457 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 MUTP22033 750 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 SFNP31947 248 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 ZNF76P36508 570 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 RGS19P49795 217 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 MRPS9P82933 396 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 KRT76Q01546 638 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 GNL2Q13823 731 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 LARP1BQ659C4 914 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 ZNF746Q6NUN9 644 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 SMAP1Q8IYB5 467 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 KLHDC9Q8NEP7 349 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 SH3TC2Q8TF17 1288 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 U2AF1L4Q8WU68 220 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 PIBF1Q8WXW3 757 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 TBC1D5Q92609 795 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 SDF4Q9BRK5 362 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 XPNPEP3Q9NQH7 507 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 ZHX1Q9UKY1 873 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-205ENST00000506880 CEP131Q9UPN4 1083 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 PPME1Q9Y570 386 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 ATP6V1DQ9Y5K8 247 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 MRVI1Q9Y6F6 885 aa9.61□□□□□ -0.87
PDGFC-205ENST00000506880 hCG_1642624A0A1W2PR95 340 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 JAK2O60674 1132 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 ADAMTS4O75173 837 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 TXNP10599 105 aaKnown RBP9.6□□□□□ -0.87
PDGFC-205ENST00000506880 ANP32AP39687 249 aaKnown RBP9.6□□□□□ -0.87
PDGFC-205ENST00000506880 PRPHP41219 470 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 DGKDQ16760 1214 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 CELF3Q5SZQ8 465 aaKnown RBP9.6□□□□□ -0.87
PDGFC-205ENST00000506880 ARL6IP4Q66PJ3 421 aaKnown RBP9.6□□□□□ -0.87
PDGFC-205ENST00000506880 NOL8Q76FK4 1167 aaKnown RBP9.6□□□□□ -0.87
PDGFC-205ENST00000506880 TLK2Q86UE8 772 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 NEK9Q8TD19 979 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 TBCKQ8TEA7 893 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
PDGFC-205ENST00000506880 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 KCNH7Q9NS40 1196 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 PHF24Q9UPV7 400 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 PDE4DIPQ5VU43 2346 aa9.6□□□□□ -0.87
PDGFC-205ENST00000506880 IGLV3-22A0A075B6J6 115 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 IPO5O00410 1097 aaKnown RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 RGS20O76081 388 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 MYCLP12524 364 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 ITGB5P18084 799 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 CNGA1P29973 690 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 JAK3P52333 1124 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 FSCN1Q16658 493 aaKnown RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 UBE2SQ16763 222 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 NECAB2Q7Z6G3 386 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 UBE2Q1Q7Z7E8 422 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 SESTD1Q86VW0 696 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 PLA2G4DQ86XP0 818 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 FBXO16Q8IX29 292 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 DHX37Q8IY37 1157 aaKnown RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 TRPV1Q8NER1 839 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 TOX2Q96NM4 488 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 DEFB118Q96PH6 123 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 HTATIP2Q9BUP3 242 aa9.59□□□□□ -0.87
PDGFC-205ENST00000506880 ZNF215Q9UL58 517 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-205ENST00000506880 EMSYQ7Z589 1322 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 SYNRGQ9UMZ2 1314 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 BTBD18B2RXH4 712 aa9.58□□□□□ -0.88
PDGFC-205ENST00000506880 STX6O43752 255 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms