RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ETV3LQ6ZN32 361 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 RNF207Q6ZRF8 634 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 LDLRAD3Q86YD5 345 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 NT5DC4Q86YG4 428 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 ARHGEF39Q8N4T4 335 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 CPLX3Q8WVH0 158 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 NEU4Q8WWR8 484 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 KLHL6Q8WZ60 621 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 PPP1R14AQ96A00 147 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 GPRASP2Q96D09 838 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 RCC1LQ96I51 464 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 AGAP2Q99490 1192 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 PCDH18Q9HCL0 1135 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 AKT3Q9Y243 479 aa4.35□□□□□ -1.71
TOPBP1-205ENST00000506779 ANKRD34BA5PLL1 514 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 E9PSI1 815 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 B4GALT3O60512 393 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 PPP1R11O60927 126 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 KCNH1O95259 989 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 C8BP07358 591 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 NAT2P11245 290 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 PLS3P13797 630 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 THBS2P35442 1172 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 GIPRP48546 466 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 SCRN1Q12765 414 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 KIAA1211LQ6NV74 962 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 POMZP3Q6PJE2 187 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 VHLLQ6RSH7 139 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 ZC3H18Q86VM9 953 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 ZNF764Q96H86 408 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 GORASP1Q9BQQ3 440 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 YIPF4Q9BSR8 244 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 CSRNP2Q9H175 543 aa4.34□□□□□ -1.71
TOPBP1-205ENST00000506779 NOP56O00567 594 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 THBDP07204 575 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 RPL13P26373 211 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 C9orf131Q5VYM1 1079 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 MCTP2Q6DN12 878 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 CD300LDQ6UXZ3 194 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 TEX2Q8IWB9 1127 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 LINC00482Q8N8I6 264 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 SEC14L1Q92503 715 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 C11orf84Q9BUA3 381 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 GPRC5CQ9NQ84 441 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 APEX2Q9UBZ4 518 aa4.33□□□□□ -1.72
TOPBP1-205ENST00000506779 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 NASPP49321 788 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 LSM12Q3MHD2 195 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 NRN1LQ496H8 165 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 MBLAC2Q68D91 279 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 TTLL6Q8N841 843 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 KYQ8NBH2 561 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 Q8TCH9 128 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 TINF2Q9BSI4 451 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 TGIF2Q9GZN2 237 aa4.32□□□□□ -1.72
TOPBP1-205ENST00000506779 C22orf46C9J442 243 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 GJA8P48165 433 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 ZC3H6P61129 1189 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 RPL11P62913 178 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 PRAMEF18Q5VWM3 479 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 GTF2IRD2BQ6EKJ0 949 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 PLEKHH3Q7Z736 793 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 NPM2Q86SE8 214 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 GTF2IRD2Q86UP8 949 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 STK32CQ86UX6 486 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 MIB1Q86YT6 1006 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 FAM26EQ8N5C1 309 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 TXNDC5Q8NBS9 432 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 BVESQ8NE79 360 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 PLEKHO2Q8TD55 490 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 RASGRP4Q8TDF6 673 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 SHDQ96IW2 340 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 MMP19Q99542 508 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 APBA2Q99767 749 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 EMC9Q9Y3B6 208 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 DMRT1Q9Y5R6 373 aa4.31□□□□□ -1.72
TOPBP1-205ENST00000506779 SGSM2O43147 1006 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 MYO1BO43795 1136 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 FPR2P25090 351 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 ITGA1P56199 1179 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 MRPS21P82921 87 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 PTH1RQ03431 593 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 MROH9Q5TGP6 573 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 PCSK4Q6UW60 755 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 MILR1Q7Z6M3 343 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 FAM126BQ8IXS8 530 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 COPS5Q92905 334 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 LCORQ96JN0 433 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 SYT3Q9BQG1 590 aa4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 NGRNQ9NPE2 291 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 COA3Q9Y2R0 106 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-205ENST00000506779 DDX3XO00571 662 aaKnown RBP eCLIP4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 ERCC5P28715 1186 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 STAT5AP42229 794 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 SLC6A11P48066 632 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 ZNF143P52747 638 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 EPHB4P54760 987 aa4.29□□□□□ -1.72
TOPBP1-205ENST00000506779 CASP7P55210 303 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms