RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FTCDO95954 541 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 PCP11498 1178 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 ERCC3P19447 782 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 TMOD1P28289 359 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 RUFY4Q6ZNE9 571 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 TMC4Q7Z404 712 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 GPIHBP1Q8IV16 184 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 CCT6BQ92526 530 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 ANKRD36CQ5JPF3 1778 aa18.83■□□□□ 0.6
SQSTM1-211ENST00000506690 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 BHMG1C9JSJ3 638 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 RTN2O75298 545 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 ZPR1O75312 459 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 GHRP10912 638 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 PPP2R2AP63151 447 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 ASIC1P78348 528 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 CUL1Q13616 776 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 OR2W6PQ8NHA6 318 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 RASGRP4Q8TDF6 673 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 TBC1D22AQ8WUA7 517 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 RAPGEF5Q92565 580 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 LRRC45Q96CN5 670 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 SH3GLB2Q9NR46 395 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 MAGEB6P1A0A0J9YX57 407 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 LAD1O00515 517 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 PRPHP41219 470 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 BCAMP50895 628 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 AGBL2Q5U5Z8 902 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 CNNM4Q6P4Q7 775 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 ARHGAP27Q6ZUM4 889 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 KDM4CQ9H3R0 1056 aa18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 CNOT8Q9UFF9 292 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 TRMT112Q9UI30 125 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-211ENST00000506690 IBSPP21815 317 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 NBPF9Q3BBW0 867 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 RIOK1Q9BRS2 568 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 A0A1B0GUA9 196 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 CES2O00748 559 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 PPP1R12AO14974 1030 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 PAX7P23759 505 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 CTNNA1P35221 906 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 DNA2P51530 1060 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 HLTFQ14527 1009 aaKnown RBP eCLIP18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 E2F5Q15329 346 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 CABP7Q86V35 215 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 AK8Q96MA6 479 aa18.81■□□□□ 0.6
SQSTM1-211ENST00000506690 LTBP4Q8N2S1 1624 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 OPLAHO14841 1288 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 KLRC1P26715 233 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 CLNS1AP54105 237 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 GKAP1Q5VSY0 366 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 KLHL7Q8IXQ5 586 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 CCDC194A0A1B0GVG4 234 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 EHHADHQ08426 723 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 TDRD12Q587J7 1177 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 CACNA2D4Q7Z3S7 1137 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 SYN2Q92777 582 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 PACSIN2Q9UNF0 486 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-211ENST00000506690 ORC4O43929 436 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 NMT2O60551 498 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 TLR2O60603 784 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 RNASE9P60153 205 aaKnown RBP18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 FMNL3Q8IVF7 1028 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 LUC7LQ9NQ29 371 aaKnown RBP18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 PCDHA6Q9UN73 950 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 PCDHA8Q9Y5H6 950 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 PPIP5K2O43314 1243 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 SERPING1P05155 500 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 DRD4P21917 467 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 ELF3P78545 371 aaPredicted RBP18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 KCNMA1Q12791 1236 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 DNAJC10Q8IXB1 793 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 SCFD2Q8WU76 684 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 GPKOWQ92917 476 aaPredicted RBP eCLIP18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 SLC39A2Q9NP94 309 aa18.79■□□□□ 0.6
SQSTM1-211ENST00000506690 ATP6V1G2O95670 118 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 FGFR1OPO95684 399 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 SLC8A3P57103 927 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 AMPD3Q01432 767 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 PPP2R5AQ15172 486 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 INF2Q27J81 1249 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 ODF2Q5BJF6 829 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 NUCKS1Q9H1E3 243 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 NEUROG2Q9H2A3 272 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 TCP11L1Q9NUJ3 509 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 CICQ96RK0 1608 aaPredicted RBP18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 F8W031 263 aaPredicted RBP18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 BACH1O14867 736 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 PPARDQ03181 441 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 MTMR3Q13615 1198 aa18.78■□□□□ 0.6
SQSTM1-211ENST00000506690 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms