RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 EPHB1P54762 984 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 GSTO1P78417 241 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 MRPS5P82675 430 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 LACTBP83111 547 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 NFKB2Q00653 900 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 NFIAQ12857 509 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 CAMK2GQ13555 558 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 PRKG1Q13976 671 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 GRIN2CQ14957 1233 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 BRD3Q15059 726 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 UBE3CQ15386 1083 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 FXNQ16595 210 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 PPP1R26Q5T8A7 1209 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 SLC9C2Q5TAH2 1124 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 PDE12Q6L8Q7 609 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 NAA16Q6N069 864 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 SPATC1Q76KD6 591 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 FAM83AQ86UY5 434 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 SKAP1Q86WV1 359 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 DZIP1Q86YF9 867 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 SLITRK4Q8IW52 837 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 ZFPM1Q8IX07 1006 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 ZNF295-AS1Q8N0V1 137 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 CMTR1Q8N1G2 835 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 MAGEB6Q8N7X4 407 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 UBR7Q8N806 425 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 GLIS3Q8NEA6 775 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 RAET1EQ8TD07 263 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 PAWRQ96IZ0 340 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 RIOK1Q9BRS2 568 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 ARHGAP39Q9C0H5 1083 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 EHD4Q9H223 541 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 USP40Q9NVE5 1235 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 RAI14Q9P0K7 980 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 SRRDQ9UH36 339 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 ANGEL1Q9UNK9 670 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 SCAF8Q9UPN6 1271 aaKnown RBP5.82□□□□□ -1.48
CPNE4-207ENST00000506687 MYH7P12883 1935 aa5.82□□□□□ -1.48
CPNE4-207ENST00000506687 ZNF532Q9HCE3 1301 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 TTC28Q96AY4 2481 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 CLRN2A0PK11 232 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 ALG1L2C9J202 215 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 TGFBR3LH3BV60 316 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 TLR3O15455 904 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 RNF113AO15541 343 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 IDH1O75874 414 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 GJB6O95452 261 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 GSPT1P15170 499 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 CYP7A1P22680 504 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 BTDP43251 543 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 GIPRP48546 466 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 LIG3P49916 1009 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 IDH3AP50213 366 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 RBM5P52756 815 aaKnown RBP eCLIP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 CACNB3P54284 484 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 DYNLL1P63167 89 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 CENPCQ03188 943 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 SSRP1Q08945 709 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 TRIP4Q15650 581 aaPredicted RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 CTC1Q2NKJ3 1217 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 TTC22Q5TAA0 569 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 THNSL2Q86YJ6 484 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 APOBEC3FQ8IUX4 373 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 SYNPOQ8N3V7 929 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 NME8Q8N427 588 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 C1orf127Q8N9H9 656 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 USP38Q8NB14 1042 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 SH3RF3Q8TEJ3 882 aaPredicted RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 FAM151AQ8WW52 585 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 FERD3LQ96RJ6 166 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 PUS7LQ9H0K6 701 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 DEFB129Q9H1M3 183 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 TNKS2Q9H2K2 1166 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 SCUBE2Q9NQ36 999 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 DDX4Q9NQI0 724 aaKnown RBP5.81□□□□□ -1.48
CPNE4-207ENST00000506687 THEGQ9P2T0 379 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 HRH3Q9Y5N1 445 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 CDK5RAP2Q96SN8 1893 aa5.81□□□□□ -1.48
CPNE4-207ENST00000506687 MAST2Q6P0Q8 1798 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 MYO1BO43795 1136 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 TLR2O60603 784 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 ENTPD3O75355 529 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 DDAH1O94760 285 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 BAG3O95817 575 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 S1PR4O95977 384 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 MYL1P05976 194 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 ZFYP08048 801 aaPredicted RBP5.8□□□□□ -1.48
CPNE4-207ENST00000506687 SDSP20132 328 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 STAT3P40763 770 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 GRM5P41594 1212 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 LMNB2Q03252 620 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 FOXD4Q12950 439 aaPredicted RBP5.8□□□□□ -1.48
CPNE4-207ENST00000506687 DHX8Q14562 1220 aaKnown RBP5.8□□□□□ -1.48
CPNE4-207ENST00000506687 TM4SF20Q53R12 229 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 ZMYM1Q5SVZ6 1142 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 SV2BQ7L1I2 683 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 C14orf80Q86SX3 495 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 CDAN1Q8IWY9 1227 aa5.8□□□□□ -1.48
CPNE4-207ENST00000506687 CCDC116Q8IYX3 515 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms