RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TMEM265A0A087WTH1 108 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 GGPS1O95749 300 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 F2P00734 622 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 ACRP10323 421 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 CASTP20810 708 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 RCAN1P53805 252 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 CCL23P55773 120 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 SEMA3FQ13275 785 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 HSDL1Q3SXM5 330 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 XRRA1Q6P2D8 792 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 DHX37Q8IY37 1157 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 PPP1R13LQ8WUF5 828 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 HERVK_113Q902F9 699 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 ZFP91Q96JP5 570 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 TTYH1Q9H313 450 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 FAM217BQ9NTX9 383 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 STXBP5LQ9Y2K9 1186 aa10.46□□□□□ -0.73
PDLIM5-209ENST00000506632 TANC1Q9C0D5 1861 aa10.46□□□□□ -0.74
PDLIM5-209ENST00000506632 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 hCG_1642624A0A1W2PR95 340 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 ZBTB43O43298 467 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 EPB41L2O43491 1005 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 PPFIA4O75335 1185 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 HMGB1P09429 215 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 RBL2Q08999 1139 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 FAM47CQ5HY64 1035 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 SYNE3Q6ZMZ3 975 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 CUL5Q93034 780 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 SCLYQ96I15 445 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 AGXT2Q9BYV1 514 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 BCAS3Q9H6U6 928 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 GTF2IRD1Q9UHL9 959 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
PDLIM5-209ENST00000506632 NID2Q14112 1375 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 FIBPO43427 364 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 FGBP02675 491 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 ZNF286BP0CG31 522 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 CPA1P15085 419 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 DNAJB2P25686 324 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 CDC27P30260 824 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 PSEN2P49810 448 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 MFSD10Q14728 455 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 RTN1Q16799 776 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 GNPTABQ3T906 1256 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 WWC2Q6AWC2 1192 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 GDF6Q6KF10 455 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 METTL7BQ6UX53 244 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 TEX2Q8IWB9 1127 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 DHX38Q92620 1227 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 SPATA33Q96N06 139 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 SENP7Q9BQF6 1050 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 C16orf70Q9BSU1 422 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 CXXC1Q9P0U4 656 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 HDAC6Q9UBN7 1215 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 SCN5AQ14524 2016 aa10.44□□□□□ -0.74
PDLIM5-209ENST00000506632 GOLGA8AA7E2F4 631 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 GOLGA8BA8MQT2 603 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 hCG_1984214I3L0E3 225 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 REC8O95072 547 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 NEFLP07196 543 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 PFKMP08237 780 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 IQCF3P0C7M6 154 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 HOXC8P31273 242 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 RFC2P35250 354 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 BFSP2Q13515 415 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 NEDD9Q14511 834 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 PTGISQ16647 500 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 UBE2SQ16763 222 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 KIAA0753Q2KHM9 967 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 PPP1R18Q6NYC8 613 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 RPUSD2Q8IZ73 545 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 ZNF713Q8N859 430 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 CAGE1Q8TC20 777 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 GPRASP2Q96D09 838 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 JAKMIP1Q96N16 626 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 MTIF3Q9H2K0 278 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 MLXIPQ9HAP2 919 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 RTEL1Q9NZ71 1219 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 TET1Q8NFU7 2136 aa10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 TRIP12Q14669 1992 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-209ENST00000506632 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
PDLIM5-209ENST00000506632 GRXCR1A8MXD5 290 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms