RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CDC27P30260 824 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 PLA2G5P39877 138 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 TMTC2Q8N394 836 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 TMEM199Q8N511 208 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 SAMD3Q8N6K7 520 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 USP38Q8NB14 1042 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 DHX38Q92620 1227 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 WNT8BQ93098 351 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 EMID1Q96A84 441 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 SNX14Q9Y5W7 946 aa19.32■□□□□ 0.68
PDLIM7-215ENST00000506161 MUC3AQ02505 3323 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 SIP14410 1827 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 HAS3O00219 553 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 ADAMTS3O15072 1205 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 HOXD8P13378 290 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 CCND2P30279 289 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 ZNF200P98182 395 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 GPNMBQ14956 572 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 CELF3Q5SZQ8 465 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 NFRKBQ6P4R8 1299 aa19.31■□□□□ 0.68
PDLIM7-215ENST00000506161 HSPA4P34932 840 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 RNF20Q5VTR2 975 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 OTOP2Q7RTS6 562 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 DHX37Q8IY37 1157 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 PPTC7Q8NI37 304 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 FAM122AQ96E09 287 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 INPP4AQ96PE3 977 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 LZTS2Q9BRK4 669 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 ALG1Q9BT22 464 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 HDAC6Q9UBN7 1215 aa19.3■□□□□ 0.68
PDLIM7-215ENST00000506161 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 KPNA6O60684 536 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 F2P00734 622 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 CALM1P0DP23 149 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 CALM2P0DP24 149 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 CALM3P0DP25 149 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 PSEN2P49810 448 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 GNAQP50148 359 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 GRIN2CQ14957 1233 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 TCTN1Q2MV58 587 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 HERVK_113Q902F9 699 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 C16orf70Q9BSU1 422 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 PBX4Q9BYU1 374 aa19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 SEC63Q9UGP8 760 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-215ENST00000506161 KLF18A0A0U1RQI7 1052 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 SPATA31C2B4DYI2 1134 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 DNAJB2P25686 324 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 ICAM3P32942 547 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 APOBRQ0VD83 1088 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 LAMC2Q13753 1193 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 DGKDQ16760 1214 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 BRDTQ58F21 947 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 DEFB128Q7Z7B8 93 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 SESTD1Q86VW0 696 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 PGBD1Q96JS3 809 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 JAKMIP1Q96N16 626 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
PDLIM7-215ENST00000506161 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 ATP9AO75110 1047 aa19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 CASTP20810 708 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 PTPN11Q06124 597 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 MFSD10Q14728 455 aa19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 PTGISQ16647 500 aa19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 KIAA0753Q2KHM9 967 aa19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 PSRC1Q6PGN9 363 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 GTF2IRD1Q9UHL9 959 aa19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 YBX2Q9Y2T7 364 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-215ENST00000506161 KAT6AQ92794 2004 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 GOLGA8BA8MQT2 603 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 ZBTB43O43298 467 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 FGBP02675 491 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 IQCF3P0C7M6 154 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 ADD1P35611 737 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 TRAF1Q13077 416 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 RTN1Q16799 776 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 TRIM71Q2Q1W2 868 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 PCNX4Q63HM2 1172 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 TRAF7Q6Q0C0 670 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 Q6ZUG5 572 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 CYFIP1Q7L576 1253 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 HEATR3Q7Z4Q2 680 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 TRIM50Q86XT4 487 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 ATXN2LQ8WWM7 1075 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 PSTPIP2Q9H939 334 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 MYO9BQ13459 2157 aa19.26■□□□□ 0.67
PDLIM7-215ENST00000506161 WDR81Q562E7 1941 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 PPFIA3O75145 1194 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 SUPT20HL2P0C7V6 817 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 TGFB3P10600 412 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 MYOGP15173 224 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 ITGB5P18084 799 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 RABGGTBP53611 331 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 BRF1Q92994 677 aa19.25■□□□□ 0.67
PDLIM7-215ENST00000506161 OSBPL7Q9BZF2 842 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms