RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NOL8Q76FK4 1167 aaKnown RBP4.14□□□□□ -1.75
TCOF1-208ENST00000506063 FIBCD1Q8N539 461 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 GLIS3Q8NEA6 775 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 RASGRP4Q8TDF6 673 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 MORC4Q8TE76 937 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 KAT2BQ92831 832 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 DDX11Q96FC9 970 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 BORCS6Q96GS4 357 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 NEK1Q96PY6 1258 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 APOL5Q9BWW9 433 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 TEX13BQ9BXU2 312 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 TBC1D17Q9HA65 648 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 GPR108Q9NPR9 543 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 TSHZ2Q9NRE2 1034 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 GNL3LQ9NVN8 582 aaKnown RBP4.14□□□□□ -1.75
TCOF1-208ENST00000506063 HMG20BQ9P0W2 317 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 SERPINB13Q9UIV8 391 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 TMX2Q9Y320 296 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 NR2E1Q9Y466 385 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 PCDHGA2Q9Y5H1 932 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.14□□□□□ -1.75
TCOF1-208ENST00000506063 NBPF19A0A087WUL8 3843 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 ATG2BQ96BY7 2078 aa4.14□□□□□ -1.75
TCOF1-208ENST00000506063 PTPRQQ9UMZ3 2332 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 F5P12259 2224 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 RBM47A0AV96 593 aaKnown RBP4.13□□□□□ -1.75
TCOF1-208ENST00000506063 A6NJR5 290 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 FSCN2O14926 492 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 LRP3O75074 770 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 LDHCP07864 332 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 MYL3P08590 195 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 TDGF1P13385 188 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 LIMK1P53667 647 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 GNAI1P63096 354 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 COL28A1Q2UY09 1125 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 PHLDB3Q6NSJ2 640 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 C19orf48Q6RUI8 117 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 CCDC155Q8N6L0 562 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 KLHL23Q8NBE8 558 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 POF1BQ8WVV4 589 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 DDX1Q92499 740 aaKnown RBP4.13□□□□□ -1.75
TCOF1-208ENST00000506063 IL17RAQ96F46 866 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 LSM14BQ9BX40 385 aaKnown RBP4.13□□□□□ -1.75
TCOF1-208ENST00000506063 STK31Q9BXU1 1019 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 IFIH1Q9BYX4 1025 aaKnown RBP4.13□□□□□ -1.75
TCOF1-208ENST00000506063 TLE6Q9H808 572 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 SEMA4GQ9NTN9 838 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 WNT16Q9UBV4 365 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 RWDD3Q9Y3V2 267 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 MRPL42Q9Y6G3 142 aaKnown RBP4.13□□□□□ -1.75
TCOF1-208ENST00000506063 EML5Q05BV3 1969 aa4.13□□□□□ -1.75
TCOF1-208ENST00000506063 LAMA4Q16363 1823 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 GIPC1O14908 333 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 ARHGAP6O43182 974 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 TBC1D4O60343 1298 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 ALDH1L1O75891 902 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 KCNK5O95279 499 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 HLA-DOAP06340 250 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 WEE2P0C1S8 567 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 KCNA4P22459 653 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 TECP42680 631 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 CPT1AP50416 773 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 ERVFC1P60507 584 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 DYNLL1P63167 89 aaKnown RBP4.12□□□□□ -1.75
TCOF1-208ENST00000506063 GSTO1P78417 241 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 TDGQ13569 410 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 CSRP2Q16527 193 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 NAALADL2Q58DX5 795 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 SPECC1Q5M775 1068 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 EEPD1Q7L9B9 569 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 PROSER1Q86XN7 944 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 PJA1Q8NG27 643 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 TSR2Q969E8 191 aaKnown RBP4.12□□□□□ -1.75
TCOF1-208ENST00000506063 PPP2R3CQ969Q6 453 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 KIF12Q96FN5 646 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 CDCA3Q99618 268 aaPredicted RBP4.12□□□□□ -1.75
TCOF1-208ENST00000506063 TRIM34Q9BYJ4 488 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 FOXQ1Q9C009 403 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 ADAM7Q9H2U9 754 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 KCNK12Q9HB15 430 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 VTA1Q9NP79 307 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 A1CFQ9NQ94 594 aaKnown RBP4.12□□□□□ -1.75
TCOF1-208ENST00000506063 AAASQ9NRG9 546 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 ZSCAN32Q9NX65 697 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 C9orf78Q9NZ63 289 aaPredicted RBP4.12□□□□□ -1.75
TCOF1-208ENST00000506063 GTF2IRD1Q9UHL9 959 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 FBXO4Q9UKT5 387 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 USTQ9Y2C2 406 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 FBN2P35556 2912 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 KAT6AQ92794 2004 aa4.12□□□□□ -1.75
TCOF1-208ENST00000506063 MGAQ8IWI9 3026 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 CREBBPQ92793 2442 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 NOTCH2Q04721 2471 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 ASB14A6NK59 587 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 E9PSI1 815 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 DGKIO75912 1065 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 CIAO1O76071 339 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 EOMESO95936 686 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 MMP3P08254 477 aa4.11□□□□□ -1.75
TCOF1-208ENST00000506063 CFHP08603 1231 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms