RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 PRC1O43663 620 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 ZNF286BP0CG31 522 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 MYOGP15173 224 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 UBA1P22314 1058 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 RBL2Q08999 1139 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 PTK7Q13308 1070 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 ADGRE1Q14246 886 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 HSDL1Q3SXM5 330 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 IL31RAQ8NI17 732 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 CUL5Q93034 780 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 SEC63Q9UGP8 760 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-214ENST00000505746 SORBS3O60504 671 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 CA3P07451 260 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 CALM1P0DP23 149 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 CALM2P0DP24 149 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 CALM3P0DP25 149 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 CKBP12277 381 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 ICAM3P32942 547 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 LIFRP42702 1097 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 KCNJ6P48051 423 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 SP2Q02086 613 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 NEDD9Q14511 834 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 HERC6Q8IVU3 1022 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 SMARCC2Q8TAQ2 1214 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 ATXN2LQ8WWM7 1075 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 DHX38Q92620 1227 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 ESYT1Q9BSJ8 1104 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 MYL10Q9BUA6 226 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
PDLIM7-214ENST00000505746 FRMPD4Q14CM0 1322 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 SPATA31C2B4DYI2 1134 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 SLC27A2O14975 620 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 CXCL10P02778 98 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 MRPS9P82933 396 aaKnown RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 CCDC85BQ15834 202 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 XRRA1Q6P2D8 792 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 CNKSR3Q6P9H4 555 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 INPP4AQ96PE3 977 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 GTF3C3Q9Y5Q9 886 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 UNC80Q8N2C7 3258 aa13.91□□□□□ -0.18
PDLIM7-214ENST00000505746 H3BRB1 525 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 FIBPO43427 364 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 EFCAB14O75071 495 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 GPNMBQ14956 572 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 NLRX1Q86UT6 975 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 GPKOWQ92917 476 aaPredicted RBP eCLIP13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 TUT1Q9H6E5 874 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 ANO2Q9NQ90 1003 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 RTEL1Q9NZ71 1219 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 THEGQ9P2T0 379 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 CDH23Q9H251 3354 aa13.9□□□□□ -0.18
PDLIM7-214ENST00000505746 ABHD14A-ACY1A0A1B0GW23 586 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 TLL1O43897 1013 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 NBNO60934 754 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 LGALS2P05162 132 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 WDR5P61964 334 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 ZNF200P98182 395 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 IKBKEQ14164 716 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 PCNX4Q63HM2 1172 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 ZBED2Q9BTP6 218 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 PRDM6Q9NQX0 595 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 EMSYQ7Z589 1322 aa13.89□□□□□ -0.19
PDLIM7-214ENST00000505746 EYSQ5T1H1 3165 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 MEIS2O14770 477 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 GNAT1P11488 350 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 POU3F3P20264 500 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 THPOP40225 353 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 TAP1Q03518 808 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 SYNE3Q6ZMZ3 975 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms