RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SLC37A4O43826 429 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 ADCY3O60266 1144 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 F13A1P00488 732 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 MUTP22033 750 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 NEK8Q86SG6 692 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 EHMT1Q9H9B1 1298 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 DUSP11O75319 330 aaKnown RBP9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 FARP2O94887 1054 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 SMPD1P17405 629 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 IKQ13123 557 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 BECN1Q14457 450 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 STXBP2Q15833 593 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 CELF3Q5SZQ8 465 aaKnown RBP9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 CCDC82Q8N4S0 544 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 DDX11Q96FC9 970 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 RTEL1Q9NZ71 1219 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 GRK4P32298 578 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 NLRP5P59047 1200 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 ARL6IP4Q66PJ3 421 aaKnown RBP9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 PPTC7Q8NI37 304 aa9.45□□□□□ -0.9
CDC42SE2-208ENST00000505065 MSH4O15457 936 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 LYPLA2O95372 231 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 INHAP05111 366 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 ADAM17P78536 824 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 AKAP17AQ02040 695 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 PLS1Q14651 629 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 RILPL1Q5EBL4 403 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 FAM20AQ96MK3 541 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 PHF24Q9UPV7 400 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 CFBP00751 764 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 GIMAP8Q8ND71 665 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 RASGRP4Q8TDF6 673 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 SYNRGQ9UMZ2 1314 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 ANK1P16157 1881 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 ELP1O95163 1332 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 B4DLN1 442 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 MSCO60682 206 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 UBA1P22314 1058 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 CCND3P30281 292 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 CDHR1Q96JP9 859 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 MCOLN1Q9GZU1 580 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 HOMER2Q9NSB8 354 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 DDX20Q9UHI6 824 aaKnown RBP9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 IVNS1ABPQ9Y6Y0 642 aa9.44□□□□□ -0.9
CDC42SE2-208ENST00000505065 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 RBL2Q08999 1139 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 LINC01465Q8N7H1 131 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 PCYT2Q99447 389 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 SEZ6LQ9BYH1 1024 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 WDR11Q9BZH6 1224 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 TRIP12Q14669 1992 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 TMEM63BQ5T3F8 832 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 ARHGEF16Q5VV41 709 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 ABHD15Q6UXT9 468 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 NOL8Q76FK4 1167 aaKnown RBP9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 CYP2W1Q8TAV3 490 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 KCNH7Q9NS40 1196 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 PPP6R2O75170 966 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 ARP10275 920 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 GJA8P48165 433 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 PDIA5Q14554 519 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 TRIM17Q9Y577 477 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 MAFBQ9Y5Q3 323 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 KIAA1671Q9BY89 1806 aa9.43□□□□□ -0.9
CDC42SE2-208ENST00000505065 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 TDP2O95551 362 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 AKR1A1P14550 325 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 CCDC144BQ3MJ40 725 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 MFSD14CQ5VZR4 134 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 MPHOSPH6Q99547 160 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 GPR20Q99678 358 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 PDGFCQ9NRA1 345 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 FBXO2Q9UK22 296 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 ATP9AO75110 1047 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 CCNE2O96020 404 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 METTL7BQ6UX53 244 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 RAD21O60216 631 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 YEATS4O95619 227 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 RGS19P49795 217 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 NSMFQ6X4W1 530 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 C16orf70Q9BSU1 422 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 DTNBO60941 627 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 GJB1P08034 283 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms