RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 GTF3C6Q969F1 213 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-220ENST00000505005 SDF4Q9BRK5 362 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 ZNF215Q9UL58 517 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-220ENST00000505005 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 HTTP42858 3142 aa11.24□□□□□ -0.61
NR1I3-220ENST00000505005 ARVCFO00192 962 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 SREBF1P36956 1147 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
NR1I3-220ENST00000505005 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-220ENST00000505005 SCRN1Q12765 414 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 STK3Q13188 491 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 MTMR1Q13613 665 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 PKN1Q16512 942 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 CEP55Q53EZ4 464 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 CELF3Q5SZQ8 465 aaKnown RBP11.23□□□□□ -0.61
NR1I3-220ENST00000505005 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-220ENST00000505005 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 KRT25Q7Z3Z0 450 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 CCDC155Q8N6L0 562 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 FAM184AQ8NB25 1140 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.614e-7■■■■■ 40.8
NR1I3-220ENST00000505005 PHKBQ93100 1093 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 ANO3Q9BYT9 981 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 TBC1D22BQ9NU19 505 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 COL20A1Q9P218 1284 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 ORC3Q9UBD5 711 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-220ENST00000505005 TPCN1Q9ULQ1 816 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
NR1I3-220ENST00000505005 ASTN1O14525 1302 aa11.23□□□□□ -0.61
NR1I3-220ENST00000505005 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 NFASCO94856 1347 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 SEC24BO95487 1268 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
NR1I3-220ENST00000505005 MNX1P50219 401 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-220ENST00000505005 SLC26A2P50443 739 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 BLIDQ8IZY5 108 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 SPATA33Q96N06 139 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 MXRA8Q9BRK3 442 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 BACH2Q9BYV9 841 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 UBIAD1Q9Y5Z9 338 aa11.22□□□□□ -0.61
NR1I3-220ENST00000505005 PDE4DIPQ5VU43 2346 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 LRRC37A2A6NM11 1700 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-220ENST00000505005 GGPS1O95749 300 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 CLTBP09497 229 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 CIITAP33076 1130 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 BMP8BP34820 402 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 RTP1P59025 263 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 ARHGAP4P98171 946 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 PURAQ00577 322 aaKnown RBP11.21□□□□□ -0.61
NR1I3-220ENST00000505005 ITGA7Q13683 1181 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.61
NR1I3-220ENST00000505005 ME3Q16798 604 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 LY6KQ17RY6 165 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 SESTD1Q86VW0 696 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 SEPT1Q8WYJ6 367 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.61
NR1I3-220ENST00000505005 AZI2Q9H6S1 392 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 NCOA5Q9HCD5 579 aaKnown RBP11.21□□□□□ -0.61
NR1I3-220ENST00000505005 NOD1Q9Y239 953 aa11.21□□□□□ -0.61
NR1I3-220ENST00000505005 LCTP09848 1927 aa11.21□□□□□ -0.62
NR1I3-220ENST00000505005 CENPFP49454 3210 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 hCG_1642624A0A1W2PR95 340 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 MEIS1O00470 390 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 DKC1O60832 514 aaKnown RBP eCLIP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 BAG4O95429 457 aaKnown RBP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 MMP3P08254 477 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 MYL3P08590 195 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 CDK7P50613 346 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 ORC2Q13416 577 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 SMAP1Q8IYB5 467 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 SLC43A3Q8NBI5 491 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
NR1I3-220ENST00000505005 FERMT2Q96AC1 680 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 ALG1Q9BT22 464 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 SMARCAD1Q9H4L7 1026 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 TMEM39AQ9NV64 488 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 ATP11BQ9Y2G3 1177 aa11.2□□□□□ -0.62
NR1I3-220ENST00000505005 MYH7BA7E2Y1 1941 aa11.19□□□□□ -0.62
NR1I3-220ENST00000505005 RAG1P15918 1043 aa11.19□□□□□ -0.62
NR1I3-220ENST00000505005 PDCP20941 246 aa11.19□□□□□ -0.62
NR1I3-220ENST00000505005 UBA1P22314 1058 aaKnown RBP11.19□□□□□ -0.62
NR1I3-220ENST00000505005 KRT2P35908 639 aa11.19□□□□□ -0.62
NR1I3-220ENST00000505005 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-220ENST00000505005 KRT76Q01546 638 aa11.19□□□□□ -0.62
NR1I3-220ENST00000505005 BFSP2Q13515 415 aa11.19□□□□□ -0.62
NR1I3-220ENST00000505005 GNL2Q13823 731 aaKnown RBP11.19□□□□□ -0.62
NR1I3-220ENST00000505005 COL9A3Q14050 684 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms