RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 C7orf61Q8IZ16 206 aa23.64■■□□□ 1.37
DDR1-255ENST00000504927 REXO1Q8N1G1 1221 aaKnown RBP23.64■■□□□ 1.37
DDR1-255ENST00000504927 NECAB1Q8N987 351 aa23.64■■□□□ 1.37
DDR1-255ENST00000504927 GPRASP2Q96D09 838 aa23.64■■□□□ 1.37
DDR1-255ENST00000504927 BACH2Q9BYV9 841 aa23.64■■□□□ 1.37
DDR1-255ENST00000504927 VPS54Q9P1Q0 977 aa23.64■■□□□ 1.37
DDR1-255ENST00000504927 A0A0U1RQG5 324 aaPredicted RBP23.63■■□□□ 1.37
DDR1-255ENST00000504927 CELF3Q5SZQ8 465 aaKnown RBP23.63■■□□□ 1.37
DDR1-255ENST00000504927 MYSM1Q5VVJ2 828 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 CXCL17Q6UXB2 119 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 GIMAP8Q8ND71 665 aaPredicted RBP23.63■■□□□ 1.37
DDR1-255ENST00000504927 ZFP91Q96JP5 570 aaPredicted RBP23.63■■□□□ 1.37
DDR1-255ENST00000504927 TOX2Q96NM4 488 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 SENP7Q9BQF6 1050 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 ANO3Q9BYT9 981 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 ATP11BQ9Y2G3 1177 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 UBIAD1Q9Y5Z9 338 aa23.63■■□□□ 1.37
DDR1-255ENST00000504927 MROH7Q68CQ1 1323 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 ST18O60284 1047 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 CTDNEP1O95476 244 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 SREBF1P36956 1147 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 JAKMIP3Q5VZ66 844 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 ANKRD33Q7Z3H0 272 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 PPTC7Q8NI37 304 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 AFG1LQ8WV93 481 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 TBC1D32Q96NH3 1257 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 MLXIPQ9HAP2 919 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 SH2B1Q9NRF2 756 aaPredicted RBP23.62■■□□□ 1.37
DDR1-255ENST00000504927 TMEM260Q9NX78 707 aa23.62■■□□□ 1.37
DDR1-255ENST00000504927 ORC3Q9UBD5 711 aaPredicted RBP23.62■■□□□ 1.37
DDR1-255ENST00000504927 ARVCFO00192 962 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 LARGE1O95461 756 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 MYL3P08590 195 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 CDK7P50613 346 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 PURAQ00577 322 aaKnown RBP23.61■■□□□ 1.37
DDR1-255ENST00000504927 SP2Q02086 613 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 DGKDQ16760 1214 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 TRIM60Q495X7 471 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 MTG1Q9BT17 334 aaPredicted RBP23.61■■□□□ 1.37
DDR1-255ENST00000504927 JADE2Q9NQC1 790 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 PCDHA4Q9UN74 947 aa23.61■■□□□ 1.37
DDR1-255ENST00000504927 DCDC2CA8MYV0 355 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 PPFIA4O75335 1185 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 GGPS1O95749 300 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 CYP3A4P08684 503 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 ITGB5P18084 799 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 UBA1P22314 1058 aaKnown RBP23.6■■□□□ 1.37
DDR1-255ENST00000504927 ITGA7Q13683 1181 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 MXRA8Q9BRK3 442 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 PRKAG2Q9UGJ0 569 aa23.6■■□□□ 1.37
DDR1-255ENST00000504927 KIAA1217Q5T5P2 1943 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 MMP3P08254 477 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 ZNF76P36508 570 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 ARHGAP4P98171 946 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 TLE2Q04725 743 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 SEMA3FQ13275 785 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 MTMR1Q13613 665 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 CEP55Q53EZ4 464 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 SLC43A3Q8NBI5 491 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 DAGLBQ8NCG7 672 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 PGBD1Q96JS3 809 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 SPATA33Q96N06 139 aa23.59■■□□□ 1.37
DDR1-255ENST00000504927 LLPHQ9BRT6 129 aaKnown RBP23.59■■□□□ 1.37
DDR1-255ENST00000504927 METTL7BQ6UX53 244 aa23.58■■□□□ 1.37
DDR1-255ENST00000504927 NIPA1Q7RTP0 329 aa23.58■■□□□ 1.37
DDR1-255ENST00000504927 BLIDQ8IZY5 108 aa23.58■■□□□ 1.37
DDR1-255ENST00000504927 NSUN7Q8NE18 718 aaKnown RBP23.58■■□□□ 1.37
DDR1-255ENST00000504927 AIFM3Q96NN9 605 aa23.58■■□□□ 1.37
DDR1-255ENST00000504927 TRIOBPQ9H2D6 2365 aa23.58■■□□□ 1.37
DDR1-255ENST00000504927 MEIS1O00470 390 aa23.57■■□□□ 1.36
DDR1-255ENST00000504927 PQBP1O60828 265 aaKnown RBP23.57■■□□□ 1.36
DDR1-255ENST00000504927 FDPSP14324 419 aaKnown RBP23.57■■□□□ 1.36
DDR1-255ENST00000504927 CYFIP1Q7L576 1253 aa23.57■■□□□ 1.36
DDR1-255ENST00000504927 CRYGNQ8WXF5 182 aa23.57■■□□□ 1.36
DDR1-255ENST00000504927 PHF20Q9BVI0 1012 aa23.57■■□□□ 1.36
DDR1-255ENST00000504927 ZMYND8Q9ULU4 1186 aaPredicted RBP23.57■■□□□ 1.36
DDR1-255ENST00000504927 TLR3O15455 904 aaKnown RBP23.56■■□□□ 1.36
DDR1-255ENST00000504927 CLTBP09497 229 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 HOXD8P13378 290 aaPredicted RBP23.56■■□□□ 1.36
DDR1-255ENST00000504927 MCM2P49736 904 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 USP11P51784 963 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 HSDL1Q3SXM5 330 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 ALG1Q9BT22 464 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 KCNH7Q9NS40 1196 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 COLQQ9Y215 455 aaPredicted RBP23.56■■□□□ 1.36
DDR1-255ENST00000504927 GRIN2DO15399 1336 aa23.56■■□□□ 1.36
DDR1-255ENST00000504927 NOP56O00567 594 aaKnown RBP23.55■■□□□ 1.36
DDR1-255ENST00000504927 ADAMTS3O15072 1205 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 SYN1P17600 705 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 PSMC6P62333 389 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 NFRKBQ6P4R8 1299 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 RASGRP4Q8TDF6 673 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 KATNAL1Q9BW62 490 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 LAMA3Q16787 3333 aa23.55■■□□□ 1.36
DDR1-255ENST00000504927 M0R2N6 131 aa23.54■■□□□ 1.36
DDR1-255ENST00000504927 ATP9AO75110 1047 aa23.54■■□□□ 1.36
DDR1-255ENST00000504927 KCNA2P16389 499 aa23.54■■□□□ 1.36
DDR1-255ENST00000504927 PTPN11Q06124 597 aaPredicted RBP23.54■■□□□ 1.36
DDR1-255ENST00000504927 FAAP100Q0VG06 881 aa23.54■■□□□ 1.36
DDR1-255ENST00000504927 CHRDL2Q6WN34 429 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms