RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 TMC6Q7Z403 805 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 CTCFLQ8NI51 663 aaPredicted RBP9.97□□□□□ -0.81
CASC9-201ENST00000504531 COL26A1Q96A83 441 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 CCDC51Q96ER9 411 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 C16orf45Q96MC5 204 aaPredicted RBP9.97□□□□□ -0.81
CASC9-201ENST00000504531 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
CASC9-201ENST00000504531 MAN1B1Q9UKM7 699 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 IRS2Q9Y4H2 1338 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 CCDC88AQ3V6T2 1871 aa9.97□□□□□ -0.81
CASC9-201ENST00000504531 LAMB1P07942 1786 aa9.96□□□□□ -0.81
CASC9-201ENST00000504531 TOP1P11387 765 aaKnown RBP9.96□□□□□ -0.82
CASC9-201ENST00000504531 HSPA6P17066 643 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 GUCY1A2P33402 732 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 SPAG1Q07617 926 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 NCBP1Q09161 790 aaKnown RBP9.96□□□□□ -0.82
CASC9-201ENST00000504531 PNOCQ13519 176 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 NR1I3Q14994 352 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 PFKFB3Q16875 520 aaPredicted RBP9.96□□□□□ -0.82
CASC9-201ENST00000504531 SPATA1Q5VX52 437 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 IER5Q5VY09 327 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 CREBRFQ8IUR6 639 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 IQUBQ8NA54 791 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 DAGLBQ8NCG7 672 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 MYO19Q96H55 970 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 PPP1R13BQ96KQ4 1090 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 CLIC6Q96NY7 704 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 PANX2Q96RD6 677 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 MAGEF1Q9HAY2 307 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 CABP5Q9NP86 173 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 RMND1Q9NWS8 449 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 OGFRQ9NZT2 677 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 ITIH6Q6UXX5 1313 aa9.96□□□□□ -0.82
CASC9-201ENST00000504531 MINDY4BA8MYZ0 360 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 POLR2DO15514 142 aaKnown RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 EFSO43281 561 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 ATP8B1O43520 1251 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 RXRAP19793 462 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 BMP6P22004 513 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 LONP1P36776 959 aaKnown RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 PPP1R2P41236 205 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 GYG1P46976 350 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 MAP3K10Q02779 954 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 CFAP100Q494V2 611 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 RRP12Q5JTH9 1297 aaKnown RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 UTP14CQ5TAP6 766 aaKnown RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 SPECC1LQ69YQ0 1117 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 ADGRA1Q86SQ6 560 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 RAB11FIP4Q86YS3 637 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 MIGA1Q8NAN2 632 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 LINC00116Q8NCU8 138 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 ZNF397Q8NF99 534 aaPredicted RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 HSH2DQ96JZ2 352 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 MYL10Q9BUA6 226 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 CUEDC2Q9H467 287 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 FANCLQ9NW38 375 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 MARK1Q9P0L2 795 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 KCNJ14Q9UNX9 436 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 PCDHB6Q9Y5E3 794 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 COL1A1P02452 1464 aaPredicted RBP9.95□□□□□ -0.82
CASC9-201ENST00000504531 CASZ1Q86V15 1759 aa9.95□□□□□ -0.82
CASC9-201ENST00000504531 MYH13Q9UKX3 1938 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 CNTNAP5Q8WYK1 1306 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 BIN1O00499 593 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 BAG3O95817 575 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 SCG2P13521 617 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 TM4SF1P30408 202 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 PRPHP41219 470 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 MECOMQ03112 1051 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 TRIM14Q14142 442 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 NPY5RQ15761 445 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 TTC38Q5R3I4 469 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 C12orf60Q5U649 245 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 CDKAL1Q5VV42 579 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 COL23A1Q86Y22 540 aaPredicted RBP9.94□□□□□ -0.82
CASC9-201ENST00000504531 AMOTL1Q8IY63 956 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 SVOPQ8N4V2 548 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 CEP63Q96MT8 703 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 CSRNP2Q9H175 543 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 GDF2Q9UK05 429 aaPredicted RBP9.94□□□□□ -0.82
CASC9-201ENST00000504531 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
CASC9-201ENST00000504531 NHSQ6T4R5 1651 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 hCG_1984214I3L0E3 225 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 SNAP23O00161 211 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 CDK11BP21127 795 aaKnown RBP9.93□□□□□ -0.82
CASC9-201ENST00000504531 ATP2B4P23634 1241 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 PBX1P40424 430 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 NOVP48745 357 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 CTBSQ01459 385 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 CUL4BQ13620 913 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 KCNB1Q14721 858 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 FILIP1LQ4L180 1135 aa9.93□□□□□ -0.82
CASC9-201ENST00000504531 ZNF385CQ66K41 422 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms