RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PAGE5Q96GU1 130 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 DISC1Q9NRI5 854 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 JRKLQ9Y4A0 524 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 PCDHB6Q9Y5E3 794 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 USH1CQ9Y6N9 552 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 CLRN2A0PK11 232 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 H7C0C1 242 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PGRMC1O00264 195 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 TXNDC9O14530 226 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ATP5OP48047 213 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 CAPN12Q6ZSI9 719 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ZNF653Q96CK0 615 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 DAAM1Q9Y4D1 1078 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 CNGA1P29973 690 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 STAT2P52630 851 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 GOLGA8FQ08AF8 430 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 GOLGA8DPQ0D2H9 430 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SH2D4BQ5SQS7 431 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SYDE2Q5VT97 1194 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 UHMK1Q8TAS1 419 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PANX2Q96RD6 677 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PFDN6O15212 129 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 MAPK4P31152 587 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 NME8Q8N427 588 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 COA7Q96BR5 231 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PGBD1Q96JS3 809 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SAMSN1Q9NSI8 373 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 EMILIN3Q9NT22 766 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 USP17L8P0C7I0 530 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 UBXN2AP68543 259 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 LRRC8CQ8TDW0 803 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SH3GLB2Q9NR46 395 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SEPT10Q9P0V9 454 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ADD3Q9UEY8 706 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 HSPA6P17066 643 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 ARHGAP4P98171 946 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 MECOMQ03112 1051 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 HIP1RO75146 1068 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 KMT5BQ4FZB7 885 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 PBKQ96KB5 322 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 BRIP1Q9BX63 1249 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 HEXIM1O94992 359 aaKnown RBP17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 CCNA1P78396 465 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 TMED8Q6PL24 325 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 CEP152O94986 1710 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 OATP04181 439 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 PLCG1P19174 1290 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 IGBP1P78318 339 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 GDF11O95390 407 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 LRRC63Q05C16 580 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 SERPING1P05155 500 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 YWHAGP61981 247 aaKnown RBP eCLIP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CUL4BQ13620 913 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PLA2G4BP0C869 781 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 IL9RQ01113 521 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 SESTD1Q86VW0 696 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 RFX6Q8HWS3 928 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PIGBQ92521 554 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 STRBPQ96SI9 672 aaKnown RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 NHEJ1Q9H9Q4 299 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PARVGQ9HBI0 331 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 EPB41L5Q9HCM4 733 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 MAD1L1Q9Y6D9 718 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CCND2P30279 289 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 GRAPQ13588 217 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CDC37Q16543 378 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 GRAPLQ8TC17 118 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 DYNLL2Q96FJ2 89 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CEP170P1Q96L14 293 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 FAM193BQ96PV7 902 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 GCNT4Q9P109 453 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CAMSAP1Q5T5Y3 1602 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 INTS9Q9NV88 658 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 CLIC2O15247 247 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 ALCAMQ13740 583 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 TTBK2Q6IQ55 1244 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 SCYL1Q96KG9 808 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 DBNDD1Q9H9R9 158 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 INHBAP08476 426 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 ITKQ08881 620 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 NXNQ6DKJ4 435 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 SGK1O00141 431 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms