RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PAGE5Q96GU1 130 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 DISC1Q9NRI5 854 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 JRKLQ9Y4A0 524 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 PCDHB6Q9Y5E3 794 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 USH1CQ9Y6N9 552 aa17.98■□□□□ 0.47
PCDHA1-203ENST00000504120 CLRN2A0PK11 232 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 H7C0C1 242 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PGRMC1O00264 195 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 TXNDC9O14530 226 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ATP5OP48047 213 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 CAPN12Q6ZSI9 719 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ZNF653Q96CK0 615 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 DAAM1Q9Y4D1 1078 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 CNGA1P29973 690 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 STAT2P52630 851 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 GOLGA8FQ08AF8 430 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 GOLGA8DPQ0D2H9 430 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SH2D4BQ5SQS7 431 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SYDE2Q5VT97 1194 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 UHMK1Q8TAS1 419 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PANX2Q96RD6 677 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 BSDC1Q9NW68 430 aaPredicted RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PFDN6O15212 129 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 MAPK4P31152 587 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 NME8Q8N427 588 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 COA7Q96BR5 231 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PGBD1Q96JS3 809 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SAMSN1Q9NSI8 373 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 EMILIN3Q9NT22 766 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 USP17L8P0C7I0 530 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 UBXN2AP68543 259 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 LRRC8CQ8TDW0 803 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SH3GLB2Q9NR46 395 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 SEPT10Q9P0V9 454 aa17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 ADD3Q9UEY8 706 aaKnown RBP17.97■□□□□ 0.47
PCDHA1-203ENST00000504120 HSPA6P17066 643 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 ARHGAP4P98171 946 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 MECOMQ03112 1051 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 HIP1RO75146 1068 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 KMT5BQ4FZB7 885 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 PBKQ96KB5 322 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 BRIP1Q9BX63 1249 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 HEXIM1O94992 359 aaKnown RBP17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 CCNA1P78396 465 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 TMED8Q6PL24 325 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 CEP152O94986 1710 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 OATP04181 439 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 PLCG1P19174 1290 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 IGBP1P78318 339 aa17.96■□□□□ 0.47
PCDHA1-203ENST00000504120 GDF11O95390 407 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 LRRC63Q05C16 580 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 SERPING1P05155 500 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 YWHAGP61981 247 aaKnown RBP eCLIP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CUL4BQ13620 913 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PLA2G4BP0C869 781 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 IL9RQ01113 521 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 SESTD1Q86VW0 696 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 RFX6Q8HWS3 928 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PIGBQ92521 554 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 STRBPQ96SI9 672 aaKnown RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 NHEJ1Q9H9Q4 299 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PARVGQ9HBI0 331 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 EPB41L5Q9HCM4 733 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 MAD1L1Q9Y6D9 718 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CCND2P30279 289 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 GRAPQ13588 217 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CDC37Q16543 378 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 GRAPLQ8TC17 118 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 DYNLL2Q96FJ2 89 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CEP170P1Q96L14 293 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 FAM193BQ96PV7 902 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 GCNT4Q9P109 453 aa17.95■□□□□ 0.46
PCDHA1-203ENST00000504120 CAMSAP1Q5T5Y3 1602 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 INTS9Q9NV88 658 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 CLIC2O15247 247 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 ALCAMQ13740 583 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 TTBK2Q6IQ55 1244 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 SCYL1Q96KG9 808 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 DBNDD1Q9H9R9 158 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 INHBAP08476 426 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 ITKQ08881 620 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 NXNQ6DKJ4 435 aa17.94■□□□□ 0.46
PCDHA1-203ENST00000504120 SGK1O00141 431 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms