RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 ICAM1P05362 532 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 HOXD10P28358 340 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 KIF5BP33176 963 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 EVCP57679 992 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 CDC37Q16543 378 aaPredicted RBP9.77□□□□□ -0.85
KDM3B-202ENST00000504095 QRICH1Q2TAL8 776 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 SYNE3Q6ZMZ3 975 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 CCAR1Q8IX12 1150 aaKnown RBP9.77□□□□□ -0.85
KDM3B-202ENST00000504095 SRBD1Q8N5C6 995 aaKnown RBP9.77□□□□□ -0.85
KDM3B-202ENST00000504095 FANCBQ8NB91 859 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 MTMR8Q96EF0 704 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 MROH8Q9H579 483 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 RIOX1Q9H6W3 641 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 JMJD4Q9H9V9 463 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 VAT1LQ9HCJ6 419 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 TMPRSS4Q9NRS4 437 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 GJD2Q9UKL4 321 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 NAP1L2Q9ULW6 460 aaPredicted RBP9.77□□□□□ -0.85
KDM3B-202ENST00000504095 PTPN22Q9Y2R2 807 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 PTCH2Q9Y6C5 1203 aa9.77□□□□□ -0.85
KDM3B-202ENST00000504095 KIAA0100Q14667 2235 aaKnown RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 NID2Q14112 1375 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 GOLGA8AA7E2F4 631 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 SPINT1O43278 529 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 DHX16O60231 1041 aaKnown RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 ALAS1P13196 640 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 CDC27P30260 824 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 COPB2P35606 906 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 FLT3LGP49771 235 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 METAP2P50579 478 aaKnown RBP eCLIP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 NEK4P51957 841 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 RCAN1P53805 252 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 PRMT2P55345 433 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 GRB14Q14449 540 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 PKN2Q16513 984 aaKnown RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 RTN1Q16799 776 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 FBXO46Q6PJ61 603 aaPredicted RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 TMTC3Q6ZXV5 915 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 USP6NLQ92738 828 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 TBC1D32Q96NH3 1257 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 SPZ1Q9BXG8 430 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 MCOLN1Q9GZU1 580 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 ALDH8A1Q9H2A2 487 aaPredicted RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 UPF2Q9HAU5 1272 aaKnown RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 CWC22Q9HCG8 908 aaKnown RBP9.76□□□□□ -0.85
KDM3B-202ENST00000504095 HOMER2Q9NSB8 354 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 RNF146Q9NTX7 359 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 CCPG1Q9ULG6 757 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
KDM3B-202ENST00000504095 SLC15A5A6NIM6 579 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 ZBTB5O15062 677 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 PPP1R11O60927 126 aaPredicted RBP9.75□□□□□ -0.85
KDM3B-202ENST00000504095 SMARCA1P28370 1054 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 ADORA2AP29274 412 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 PDIA3P30101 505 aaKnown RBP9.75□□□□□ -0.85
KDM3B-202ENST00000504095 RFC5P40937 340 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 CTSOP43234 321 aaPredicted RBP9.75□□□□□ -0.85
KDM3B-202ENST00000504095 GNAQP50148 359 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 AK2P54819 239 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 IRF5Q13568 498 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 TKFCQ3LXA3 575 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 USH1GQ495M9 461 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 MUM1L1Q5H9M0 696 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 HOMER1Q86YM7 354 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 ABRAQ8N0Z2 381 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 CHST13Q8NET6 341 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 RAET1EQ8TD07 263 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 SOCS4Q8WXH5 440 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 PIBF1Q8WXW3 757 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 TRERF1Q96PN7 1200 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 PIGSQ96S52 555 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 INSM2Q96T92 566 aaPredicted RBP9.75□□□□□ -0.85
KDM3B-202ENST00000504095 MMP19Q99542 508 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 LZTS2Q9BRK4 669 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 ACAD9Q9H845 621 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 ZNF395Q9H8N7 513 aaPredicted RBP9.75□□□□□ -0.85
KDM3B-202ENST00000504095 RBM28Q9NW13 759 aaKnown RBP9.75□□□□□ -0.85
KDM3B-202ENST00000504095 CNTNAP5Q8WYK1 1306 aa9.75□□□□□ -0.85
KDM3B-202ENST00000504095 BRCA2P51587 3418 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 PNMA6FA0A0J9YX94 578 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 STRNO43815 780 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 COBLO75128 1261 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 PGK2P07205 417 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 FCER1AP12319 257 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 CYP2B6P20813 491 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 ADD1P35611 737 aaKnown RBP9.74□□□□□ -0.85
KDM3B-202ENST00000504095 RGS2P41220 211 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 CCT2P78371 535 aaKnown RBP9.74□□□□□ -0.85
KDM3B-202ENST00000504095 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 FBXO11Q86XK2 927 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 NPLOC4Q8TAT6 608 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 CLEC4DQ8WXI8 215 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 ZNF274Q96GC6 653 aaPredicted RBP9.74□□□□□ -0.85
KDM3B-202ENST00000504095 APBA2Q99767 749 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 NCOA5Q9HCD5 579 aaKnown RBP9.74□□□□□ -0.85
KDM3B-202ENST00000504095 POLMQ9NP87 494 aaPredicted RBP9.74□□□□□ -0.85
KDM3B-202ENST00000504095 FBXO40Q9UH90 709 aa9.74□□□□□ -0.85
KDM3B-202ENST00000504095 TPCN1Q9ULQ1 816 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms