RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PLEKHG4Q58EX7 1191 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 IER5LQ5T953 404 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 RGS22Q8NE09 1264 aa18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 CHMP4BQ9H444 224 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-210ENST00000503827 KMT2EQ8IZD2 1858 aa18.58■□□□□ 0.57
PDLIM7-210ENST00000503827 TMEM221A6NGB7 291 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 M0R296 226 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 STXBP3O00186 592 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 ZNF286BP0CG31 522 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 THPOP40225 353 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 SMAD4Q13485 552 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 LAMC2Q13753 1193 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 STXBP2Q15833 593 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 TRIM67Q6ZTA4 783 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 NSUN6Q8TEA1 469 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 SEPT8Q92599 483 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 EMID1Q96A84 441 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 TMEM47Q9BQJ4 181 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 LMAN2LQ9H0V9 348 aa18.58■□□□□ 0.56
PDLIM7-210ENST00000503827 RBAK-RBAKDNI3L0D1 243 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 GFRA3O60609 400 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 DLX2Q07687 328 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 USH1GQ495M9 461 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 PPTC7Q8NI37 304 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 IWS1Q96ST2 819 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 MAF1Q9H063 256 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 DDX41Q9UJV9 622 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 MYH6P13533 1939 aa18.57■□□□□ 0.56
PDLIM7-210ENST00000503827 TRIOO75962 3097 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 RB1P06400 928 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 PDHBP11177 359 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 CTNNB1P35222 781 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 HYAL1Q12794 435 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 TCF15Q12870 199 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 TSHZ3Q63HK5 1081 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 SERINC5Q86VE9 423 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 FIBCD1Q8N539 461 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 TAAR1Q96RJ0 339 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 IFIH1Q9BYX4 1025 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 TOMM22Q9NS69 142 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 CD207Q9UJ71 328 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 C5orf42Q9H799 3197 aa18.56■□□□□ 0.56
PDLIM7-210ENST00000503827 C5orf67F2Z3F1 127 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 ORC4O43929 436 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 ZNF543Q08ER8 600 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 IL17RAQ96F46 866 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 C11orf84Q9BUA3 381 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 IRF2BPLQ9H1B7 796 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 ANAPC4Q9UJX5 808 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 RWDD3Q9Y3V2 267 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
PDLIM7-210ENST00000503827 PPFIA4O75335 1185 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 HIC1Q14526 733 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 ZMYM1Q5SVZ6 1142 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 FBXL6Q8N531 539 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 SYTL5Q8TDW5 730 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 FSD1Q9BTV5 496 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 IGFLR1Q9H665 355 aa18.54■□□□□ 0.56
PDLIM7-210ENST00000503827 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 GRM6O15303 877 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 TBX10O75333 385 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 EIF3JO75822 258 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 RRP12Q5JTH9 1297 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 ARHGEF16Q5VV41 709 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 TBC1D5Q92609 795 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 ATP6V0A1Q93050 837 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
PDLIM7-210ENST00000503827 ABCB11O95342 1321 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 C17orf102A2RUQ5 167 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 FGRP09769 529 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 HOXD8P13378 290 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 BMPR1AP36894 532 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 ZXDAP98168 799 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 MCF2L2Q86YR7 1114 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 APBB2Q92870 758 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 FAM86C1Q9NVL1 165 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 COL20A1Q9P218 1284 aa18.52■□□□□ 0.56
PDLIM7-210ENST00000503827 FOXP2O15409 715 aa18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 CAND2O75155 1236 aa18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 EIF2AK2P19525 551 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 GTF2F1P35269 517 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 NDUFV1P49821 464 aa18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 ADAM15Q13444 863 aa18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 TTC14Q96N46 770 aa18.51■□□□□ 0.55
PDLIM7-210ENST00000503827 LINC01565O15544 149 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 NR3C2P08235 984 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 CTSHP09668 335 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 HSDL1Q3SXM5 330 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 ATOH1Q92858 354 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 SPATA33Q96N06 139 aa18.5■□□□□ 0.55
PDLIM7-210ENST00000503827 ZDBF2Q9HCK1 2354 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 LOC730098B7Z3J9 87 aa18.49■□□□□ 0.55
PDLIM7-210ENST00000503827 TREHO43280 583 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms