RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 IGLV3-22A0A075B6J6 115 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 MSH4O15457 936 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 TOMM70O94826 608 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 ERCC3P19447 782 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 ERVK-24P63145 666 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 SREBF2Q12772 1141 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 FSTL1Q12841 308 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 PPP2R5CQ13362 524 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 E2F4Q16254 413 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 UVSSAQ2YD98 709 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 GNPTABQ3T906 1256 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 NT5DC1Q5TFE4 455 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 USP49Q70CQ1 688 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 VSIG10LQ86VR7 867 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 RASAL3Q86YV0 1011 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 NEK9Q8TD19 979 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 SNX29Q8TEQ0 813 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 BRI3BPQ8WY22 251 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 SLC5A5Q92911 643 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 SMARCE1Q969G3 411 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 CCDC47Q96A33 483 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 GPRASP2Q96D09 838 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 GSDMAQ96QA5 445 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 TAAR1Q96RJ0 339 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 ZNF577Q9BSK1 485 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 TEKT3Q9BXF9 490 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 MOV10L1Q9BXT6 1211 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 COL20A1Q9P218 1284 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 RBPJLQ9UBG7 517 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 MORF4L1Q9UBU8 362 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 TLL2Q9Y6L7 1015 aa9.14□□□□□ -0.95
TOPBP1-202ENST00000503338 SRCAPQ6ZRS2 3230 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 IPO5O00410 1097 aaKnown RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 KIF3CO14782 793 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 STRNO43815 780 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 GTPBP6O43824 516 aaPredicted RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 GAS7O60861 476 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 CNMDO75829 334 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 NR3C2P08235 984 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 SLC10A3P09131 477 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 FCER1AP12319 257 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 MDM2Q00987 491 aaPredicted RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 MTMR1Q13613 665 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 KCTD2Q14681 263 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 KARSQ15046 597 aaKnown RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 STXBP2Q15833 593 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 FAM110CQ1W6H9 321 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 LRCH2Q5VUJ6 765 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 GAS2L3Q86XJ1 694 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 RDM1Q8NG50 284 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 SPATA20Q8TB22 786 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 PAGE5Q96GU1 130 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 POLR3CQ9BUI4 534 aaPredicted RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 GRPEL1Q9HAV7 217 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 TUFT1Q9NNX1 390 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 RMND1Q9NWS8 449 aa9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 RBBP6Q7Z6E9 1792 aaKnown RBP9.13□□□□□ -0.95
TOPBP1-202ENST00000503338 SMCHD1A6NHR9 2005 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 A0A087X0B3 334 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 POTEMA6NI47 508 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 EIF3JO75822 258 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 PSMD10O75832 226 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 MYCLP12524 364 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 ITGB5P18084 799 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 PLCG1P19174 1290 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 RPA1P27694 616 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 SFNP31947 248 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 CCT6AP40227 531 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 PPP1R2P41236 205 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 SARSP49591 514 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 NLRP12P59046 1061 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 TMEM119Q4V9L6 283 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 KCNV1Q6PIU1 500 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 SV2BQ7L1I2 683 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 OTOP1Q7RTM1 612 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 INPP4AQ96PE3 977 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 MMP19Q99542 508 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 MMTAG2Q9BU76 263 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 PANK2Q9BZ23 570 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 TXNRD2Q9NNW7 524 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 KCNH7Q9NS40 1196 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 KBTBD4Q9NVX7 518 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 SLC5A4Q9NY91 659 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 PCDHA5Q9Y5H7 936 aa9.12□□□□□ -0.95
TOPBP1-202ENST00000503338 IVNS1ABPQ9Y6Y0 642 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms