RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 KCNK18Q7Z418 384 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 NELFBQ8WX92 580 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 VAV3Q9UKW4 847 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 SNCAIPQ9Y6H5 919 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 PAPPA2Q9BXP8 1791 aa24.62■■□□□ 1.53
PTPN13-205ENST00000502971 STAT3P40763 770 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 VGLL4Q14135 290 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 TPD52L1Q16890 204 aaPredicted RBP24.61■■□□□ 1.53
PTPN13-205ENST00000502971 COBLL1Q53SF7 1204 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 CDKAL1Q5VV42 579 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 CATSPERGQ6ZRH7 1159 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 KCTD17Q8N5Z5 321 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 UIMC1Q96RL1 719 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 RTN4Q9NQC3 1192 aaKnown RBP24.61■■□□□ 1.53
PTPN13-205ENST00000502971 KIAA1024Q9UPX6 916 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 NCAPH2Q6IBW4 605 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 SLC5A5Q92911 643 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 DHTKD1Q96HY7 919 aaPredicted RBP24.61■■□□□ 1.53
PTPN13-205ENST00000502971 CLEC11AQ9Y240 323 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 CSADQ9Y600 493 aa24.61■■□□□ 1.53
PTPN13-205ENST00000502971 MEIS1O00470 390 aa24.6■■□□□ 1.53
PTPN13-205ENST00000502971 RPA1P27694 616 aa24.6■■□□□ 1.53
PTPN13-205ENST00000502971 MUM1L1Q5H9M0 696 aa24.6■■□□□ 1.53
PTPN13-205ENST00000502971 REPS2Q8NFH8 660 aa24.6■■□□□ 1.53
PTPN13-205ENST00000502971 TRERF1Q96PN7 1200 aa24.6■■□□□ 1.53
PTPN13-205ENST00000502971 MYPNQ86TC9 1320 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 RBBP6Q7Z6E9 1792 aaKnown RBP24.59■■□□□ 1.53
PTPN13-205ENST00000502971 PSMA7O14818 248 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 MED24O75448 989 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 NF2P35240 595 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 IREB2P48200 963 aaKnown RBP24.59■■□□□ 1.53
PTPN13-205ENST00000502971 TMC6Q7Z403 805 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 FILIP1Q7Z7B0 1213 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 SYTL5Q8TDW5 730 aaPredicted RBP24.59■■□□□ 1.53
PTPN13-205ENST00000502971 NAP1L5Q96NT1 182 aaPredicted RBP24.59■■□□□ 1.53
PTPN13-205ENST00000502971 BMP2KQ9NSY1 1161 aaPredicted RBP24.59■■□□□ 1.53
PTPN13-205ENST00000502971 COL20A1Q9P218 1284 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 FRMPD4Q14CM0 1322 aa24.59■■□□□ 1.53
PTPN13-205ENST00000502971 POTEB3A0JP26 581 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 ATP2A1O14983 1001 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 PSMD10O75832 226 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 UBXN2AP68543 259 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 POTEBQ6S5H4 581 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 NIPA1Q7RTP0 329 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 CATSPER3Q86XQ3 398 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 DDX12PQ92771 950 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 CTAGE1Q96RT6 745 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 MXRA8Q9BRK3 442 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 POLR3CQ9BUI4 534 aaPredicted RBP24.58■■□□□ 1.53
PTPN13-205ENST00000502971 HOMER2Q9NSB8 354 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 HOXC10Q9NYD6 342 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 RLFQ13129 1914 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 OTOFQ9HC10 1997 aa24.58■■□□□ 1.53
PTPN13-205ENST00000502971 BCRP11274 1271 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 PSMD2Q13200 908 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 PPP2R5CQ13362 524 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 HSP90AA4PQ58FG1 418 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 LRCH2Q5VUJ6 765 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 OTOP1Q7RTM1 612 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 LRRC8AQ8IWT6 810 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 MAF1Q9H063 256 aa24.58■■□□□ 1.52
PTPN13-205ENST00000502971 PLA2G4BP0C869 781 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 SPAG1Q07617 926 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 PCNX4Q63HM2 1172 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 DYMQ7RTS9 669 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 VSTM4Q8IW00 320 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 CACTINQ8WUQ7 758 aaKnown RBP24.57■■□□□ 1.52
PTPN13-205ENST00000502971 WNK4Q96J92 1243 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 NMRK2Q9NPI5 230 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 MAPK8IP1Q9UQF2 711 aa24.57■■□□□ 1.52
PTPN13-205ENST00000502971 E9PMD0 336 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 SPATA31C1P0DKV0 1188 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 RPS6P62753 249 aaKnown RBP24.56■■□□□ 1.52
PTPN13-205ENST00000502971 STK4Q13043 487 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 TKFCQ3LXA3 575 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 DLK2Q6UY11 383 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 RNF207Q6ZRF8 634 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 CDCA5Q96FF9 252 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 ZNF577Q9BSK1 485 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 WDR11Q9BZH6 1224 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 RNF146Q9NTX7 359 aa24.56■■□□□ 1.52
PTPN13-205ENST00000502971 A0A1B0GTH6 734 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 GAS7O60861 476 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 CCDC150Q8NCX0 1101 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 KIAA1524Q8TCG1 905 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 EIF2AK1Q9BQI3 630 aaKnown RBP24.55■■□□□ 1.52
PTPN13-205ENST00000502971 DNM3Q9UQ16 869 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 BICDL2A1A5D9 508 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 POTEIP0CG38 1075 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 POTEJP0CG39 1038 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 NR1I3Q14994 352 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 APTXQ7Z2E3 356 aaKnown RBP24.55■■□□□ 1.52
PTPN13-205ENST00000502971 NOC3LQ8WTT2 800 aaKnown RBP24.55■■□□□ 1.52
PTPN13-205ENST00000502971 DNAJC19Q96DA6 116 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 RIT2Q99578 217 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 TUFT1Q9NNX1 390 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 INTS13Q9NVM9 706 aa24.55■■□□□ 1.52
PTPN13-205ENST00000502971 ZNF214Q9UL59 606 aaPredicted RBP24.55■■□□□ 1.52
PTPN13-205ENST00000502971 POTEFA5A3E0 1075 aa24.54■■□□□ 1.52
PTPN13-205ENST00000502971 ARP10275 920 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms