RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ATP13A1Q9HD20 1204 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 BTG4Q9NY30 223 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZNF281Q9Y2X9 895 aa7□□□□□ -1.29
HMGB1P3-201ENST00000502802 SLC12A8A0AV02 714 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 WTIPA6NIX2 430 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 H7C1D1 291 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 CYP26A1O43174 497 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 PEX14O75381 377 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 KRT37O76014 449 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 IGLV1-40P01703 118 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 MYBL2P10244 700 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 GNAT1P11488 350 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZSCAN20P17040 1043 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 CCND1P24385 295 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 JAM2P57087 298 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 KLF1Q13351 362 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 MLC1Q15049 377 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 GPR19Q15760 415 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 DDB1Q16531 1140 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 FAM102BQ5T8I3 360 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 NXNQ6DKJ4 435 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 NLRP10Q86W26 655 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 TTC8Q8TAM2 541 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 TRMT2BQ96GJ1 504 aaKnown RBP6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 DCAF5Q96JK2 942 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 SLC13A1Q9BZW2 595 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 SMURF1Q9HCE7 757 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 LUC7LQ9NQ29 371 aaKnown RBP6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 WASHC2AQ641Q2 1341 aa6.99□□□□□ -1.29
HMGB1P3-201ENST00000502802 GOLGA6CA6NDK9 693 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 GOLGA6BA6NDN3 693 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 TGM5O43548 720 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 AMY2AP04746 511 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 GOLGA6DP0CG33 693 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZBTB48P10074 688 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 KRT15P19012 456 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 AMY2BP19961 511 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 GRIK1P39086 918 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 IARSP41252 1262 aaKnown RBP6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 SPIRE1Q08AE8 756 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 ZNF174Q15697 407 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 BROXQ5VW32 411 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 Q8N1Y9 231 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 JPH3Q8WXH2 748 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 SYTL4Q96C24 671 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 PSMD1Q99460 953 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 RHOBTB2Q9BYZ6 727 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 GOLGA6AQ9NYA3 693 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 TNFRSF10DQ9UBN6 386 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 IP6K2Q9UHH9 426 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 NOB1Q9ULX3 412 aaKnown RBP6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 SPO11Q9Y5K1 396 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 X6R8D5 127 aa6.98□□□□□ -1.29
HMGB1P3-201ENST00000502802 RNF225M0QZC1 329 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 TPD52L2O43399 206 aaKnown RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 SNUPNO95149 360 aaKnown RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 MT-CO1P00395 513 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 FPR2P25090 351 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 CEBPAP49715 358 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 TERF2Q15554 542 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 HABP4Q5JVS0 413 aaKnown RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 HHIPL2Q6UWX4 724 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 ARHGAP36Q6ZRI8 547 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 OTOP3Q7RTS5 596 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 ASB11Q8WXH4 323 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 EPB41L1Q9H4G0 881 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 C14orf119Q9NWQ9 140 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 MARCH2Q9P0N8 246 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 GULP1Q9UBP9 304 aa6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 COA3Q9Y2R0 106 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 LUC7L2Q9Y383 392 aaKnown RBP6.97□□□□□ -1.29
HMGB1P3-201ENST00000502802 TCRBV5S4A2TA0A5A2 114 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 FZD9O00144 591 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 CFBP00751 764 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 KRT18P05783 430 aaKnown RBP6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 COL6A2P12110 1019 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 SLC9A1P19634 815 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 FSTP19883 344 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 LSP1P33241 339 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 PHC1P78364 1004 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 IRF9Q00978 393 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 MAP9Q49MG5 647 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 RASSF3Q86WH2 238 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 CERS3Q8IU89 383 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 TEX2Q8IWB9 1127 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 MAGEB6Q8N7X4 407 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 KIAA1958Q8N8K9 716 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 C1orf162Q8NEQ5 155 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 FAXDC2Q96IV6 333 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 HRASLS5Q96KN8 279 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 TCF7L1Q9HCS4 588 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 TPSG1Q9NRR2 321 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZC3H7BQ9UGR2 993 aaKnown RBP6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZNF652Q9Y2D9 606 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 RIPOR2Q9Y4F9 1068 aa6.96□□□□□ -1.3
HMGB1P3-201ENST00000502802 PLEKHD1A6NEE1 506 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms