RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 PCDHA6Q9UN73 950 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 PCDHA8Q9Y5H6 950 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 CEP290O15078 2479 aa18.42■□□□□ 0.54
LMNA-217ENST00000498722 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.54
LMNA-217ENST00000498722 EVI5O60447 810 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 ARIH2O95376 493 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 COL6A1P12109 1028 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 FDPSP14324 419 aaKnown RBP18.41■□□□□ 0.54
LMNA-217ENST00000498722 GNA11P29992 359 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 PCNX4Q63HM2 1172 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 COPS5Q92905 334 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 TMEM260Q9NX78 707 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 FRMPD4Q14CM0 1322 aa18.41■□□□□ 0.54
LMNA-217ENST00000498722 A0A1W2PQ45 241 aaPredicted RBP18.4■□□□□ 0.54
LMNA-217ENST00000498722 A0A1W2PQY0 241 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 ZEB2O60315 1214 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 FOSP01100 380 aaPredicted RBP18.4■□□□□ 0.54
LMNA-217ENST00000498722 ACLYP53396 1101 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 NLRP5P59047 1200 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 GNPTABQ3T906 1256 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 BRDTQ58F21 947 aaPredicted RBP18.4■□□□□ 0.54
LMNA-217ENST00000498722 JAKMIP3Q5VZ66 844 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
LMNA-217ENST00000498722 KLHDC9Q8NEP7 349 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 AIFM3Q96NN9 605 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 TSEN34Q9BSV6 310 aaKnown RBP18.4■□□□□ 0.54
LMNA-217ENST00000498722 ANO3Q9BYT9 981 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 ZMYND12Q9H0C1 365 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 LMBRD1Q9NUN5 540 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 PHF24Q9UPV7 400 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 Q9Y3F1 56 aa18.4■□□□□ 0.54
LMNA-217ENST00000498722 ESYT2A0FGR8 921 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 MOXD2PA6NHM9 499 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 SORBS3O60504 671 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 STAM2O75886 525 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 GH1P01241 217 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 ASGR1P07306 291 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
LMNA-217ENST00000498722 CST5P28325 142 aaPredicted RBP18.39■□□□□ 0.53
LMNA-217ENST00000498722 CPT1AP50416 773 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 KRT85P78386 507 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 MRPS9P82933 396 aaKnown RBP18.39■□□□□ 0.53
LMNA-217ENST00000498722 AP3B2Q13367 1082 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 KCNV1Q6PIU1 500 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 C7orf61Q8IZ16 206 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 TMEM87AQ8NBN3 555 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 SH3GLB2Q9NR46 395 aa18.39■□□□□ 0.53
LMNA-217ENST00000498722 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
LMNA-217ENST00000498722 RGS20O76081 388 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 XBP1P17861 261 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 LRRC26Q2I0M4 334 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 XRRA1Q6P2D8 792 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 TEX2Q8IWB9 1127 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 GLT1D1Q96MS3 346 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 STARD7Q9NQZ5 370 aa18.38■□□□□ 0.53
LMNA-217ENST00000498722 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
LMNA-217ENST00000498722 KAT6AQ92794 2004 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 CTAGE5O15320 804 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 MBD3O95983 291 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 MYL3P08590 195 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 RESTQ13127 1097 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 TRIM29Q14134 588 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 KLHL40Q2TBA0 621 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 CXCL17Q6UXB2 119 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 SLC39A5Q6ZMH5 540 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 NLRX1Q86UT6 975 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 DHX37Q8IY37 1157 aaKnown RBP18.37■□□□□ 0.53
LMNA-217ENST00000498722 RASGRP4Q8TDF6 673 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 ATP11BQ9Y2G3 1177 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 NR2E3Q9Y5X4 410 aa18.37■□□□□ 0.53
LMNA-217ENST00000498722 FIBPO43427 364 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 ZNF76P36508 570 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 CLK2P49760 499 aaKnown RBP18.36■□□□□ 0.53
LMNA-217ENST00000498722 FOSBP53539 338 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 MCTP2Q6DN12 878 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 CCSAPQ6IQ19 270 aaPredicted RBP18.36■□□□□ 0.53
LMNA-217ENST00000498722 FERMT3Q86UX7 667 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
LMNA-217ENST00000498722 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
LMNA-217ENST00000498722 ADAMTS3O15072 1205 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 GGPS1O95749 300 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 TGFB3P10600 412 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 UBA1P22314 1058 aaKnown RBP18.35■□□□□ 0.53
LMNA-217ENST00000498722 RTP1P59025 263 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 CHMP4BP1P59074 171 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
LMNA-217ENST00000498722 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
LMNA-217ENST00000498722 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
LMNA-217ENST00000498722 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 SCAND2PQ9GZW5 306 aaPredicted RBP18.35■□□□□ 0.53
LMNA-217ENST00000498722 MLXIPQ9HAP2 919 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 POLR3EQ9NVU0 708 aa18.35■□□□□ 0.53
LMNA-217ENST00000498722 PKD2L1Q9P0L9 805 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms