RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SCLYQ96I15 445 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 C12orf42Q96LP6 360 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 GLT1D1Q96MS3 346 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 NOL10Q9BSC4 688 aaKnown RBP6.74□□□□□ -1.33
SPTA1-209ENST00000498708 HIPK3Q9H422 1215 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 ETNK1Q9HBU6 452 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 GDPD2Q9HCC8 539 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 SAP30BPQ9UHR5 308 aaKnown RBP6.74□□□□□ -1.33
SPTA1-209ENST00000498708 HERC5Q9UII4 1024 aaKnown RBP6.74□□□□□ -1.33
SPTA1-209ENST00000498708 ZBTB21Q9ULJ3 1066 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 ATXN7L1Q9ULK2 861 aaPredicted RBP6.74□□□□□ -1.33
SPTA1-209ENST00000498708 HDAC5Q9UQL6 1122 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 ATRXP46100 2492 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 CNTNAP5Q8WYK1 1306 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 GVINP1Q7Z2Y8 2422 aa6.74□□□□□ -1.33
SPTA1-209ENST00000498708 A0A0U1RQG5 324 aaPredicted RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 PRR23AA6NEV1 266 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 TMEM221A6NGB7 291 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 H0Y858 1186 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 M0R296 226 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 TLR3O15455 904 aaKnown RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 BCAR3O75815 825 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 PGK2P07205 417 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 ASGR1P07306 291 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 AKR1A1P14550 325 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 VCAM1P19320 739 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 ABL2P42684 1182 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 VCPP55072 806 aaKnown RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 DYNLL1P63167 89 aaKnown RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 VAC14Q08AM6 782 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 SEMA3FQ13275 785 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 HERC4Q5GLZ8 1057 aaPredicted RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 NAA16Q6N069 864 aaPredicted RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 FIGNL1Q6PIW4 674 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 CRACR2BQ8N4Y2 399 aaPredicted RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 NEK9Q8TD19 979 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 ACER1Q8TDN7 264 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 EDAQ92838 391 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 COL26A1Q96A83 441 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 PRRX2Q99811 253 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 TINF2Q9BSI4 451 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 NOC4LQ9BVI4 516 aaKnown RBP6.73□□□□□ -1.33
SPTA1-209ENST00000498708 SPATC1LQ9H0A9 340 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 RUBCNLQ9H714 662 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 TLR9Q9NR96 1032 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 LMCD1Q9NZU5 365 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 PI4KBQ9UBF8 816 aa6.73□□□□□ -1.33
SPTA1-209ENST00000498708 ACACBO00763 2458 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 ROBO3Q96MS0 1386 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 PROB1E7EW31 1015 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 RBAK-RBAKDNI3L0D1 243 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 ADCY6O43306 1168 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 BAG3O95817 575 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 GNAI2P04899 355 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 THBS1P07996 1170 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 UQCRFS1P1P0C7P4 283 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 ARID4AP29374 1257 aaPredicted RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 ZAP70P43403 619 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 COL9A2Q14055 689 aaPredicted RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 CCDC158Q5M9N0 1113 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 DEFB128Q7Z7B8 93 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 ADGRA1Q86SQ6 560 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 NCAPG2Q86XI2 1143 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 HERC6Q8IVU3 1022 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 ADHFE1Q8IWW8 467 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 GOLGA6L1Q8N7Z2 621 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 TET1Q8NFU7 2136 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 NIFKQ9BYG3 293 aaKnown RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 CCDC8Q9H0W5 538 aaPredicted RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 TRPV6Q9H1D0 765 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 RPAP3Q9H6T3 665 aaPredicted RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 SLC5A4Q9NY91 659 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 NRBP1Q9UHY1 535 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 RALYQ9UKM9 306 aaKnown RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 PALD1Q9ULE6 856 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 FRYLO94915 3013 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 GRIN2DO15399 1336 aa6.72□□□□□ -1.33
SPTA1-209ENST00000498708 PDS5AQ29RF7 1337 aaKnown RBP6.72□□□□□ -1.33
SPTA1-209ENST00000498708 CTAGE5O15320 804 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 SURF6O75683 361 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 GH2P01242 217 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 CYP2E1P05181 493 aaPredicted RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 C6orf222P0C671 652 aaPredicted RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 TRIM27P14373 513 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 CST5P28325 142 aaPredicted RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 GDF10P55107 478 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 MTX1Q13505 466 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 PLS1Q14651 629 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 ZNF792Q3KQV3 632 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 TNNI3KQ59H18 835 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 TMCO2Q7Z6W1 182 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms