RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 LAMC2Q13753 1193 aa18.74■□□□□ 0.59
MUC1-220ENST00000498431 IKBKEQ14164 716 aa18.74■□□□□ 0.59
MUC1-220ENST00000498431 TMEM31Q5JXX7 168 aa18.74■□□□□ 0.59
MUC1-220ENST00000498431 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
MUC1-220ENST00000498431 KATNAL1Q9BW62 490 aa18.74■□□□□ 0.59
MUC1-220ENST00000498431 UBE2ZQ9H832 354 aaPredicted RBP18.74■□□□□ 0.59
MUC1-220ENST00000498431 MICAL3Q7RTP6 2002 aa18.73■□□□□ 0.59
MUC1-220ENST00000498431 PPP1R11O60927 126 aaPredicted RBP18.73■□□□□ 0.59
MUC1-220ENST00000498431 PARP1P09874 1014 aaKnown RBP18.73■□□□□ 0.59
MUC1-220ENST00000498431 HOXD8P13378 290 aaPredicted RBP18.73■□□□□ 0.59
MUC1-220ENST00000498431 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
MUC1-220ENST00000498431 HSD17B4P51659 736 aa18.73■□□□□ 0.59
MUC1-220ENST00000498431 DHX37Q8IY37 1157 aaKnown RBP18.73■□□□□ 0.59
MUC1-220ENST00000498431 STAG2Q8N3U4 1231 aa18.73■□□□□ 0.59
MUC1-220ENST00000498431 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
MUC1-220ENST00000498431 C17orf80Q9BSJ5 609 aa18.73■□□□□ 0.59
MUC1-220ENST00000498431 ZSWIM5Q9P217 1185 aa18.73■□□□□ 0.59
MUC1-220ENST00000498431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.72■□□□□ 0.59
MUC1-220ENST00000498431 LGR5O75473 907 aa18.72■□□□□ 0.59
MUC1-220ENST00000498431 MYCLP12524 364 aaPredicted RBP18.72■□□□□ 0.59
MUC1-220ENST00000498431 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
MUC1-220ENST00000498431 SP2Q02086 613 aa18.72■□□□□ 0.59
MUC1-220ENST00000498431 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
MUC1-220ENST00000498431 HSDL1Q3SXM5 330 aa18.72■□□□□ 0.59
MUC1-220ENST00000498431 CCDC178Q5BJE1 867 aa18.72■□□□□ 0.59
MUC1-220ENST00000498431 MYSM1Q5VVJ2 828 aa18.72■□□□□ 0.59
MUC1-220ENST00000498431 CWC27Q6UX04 472 aaKnown RBP18.72■□□□□ 0.59
MUC1-220ENST00000498431 GPKOWQ92917 476 aaPredicted RBP eCLIP18.72■□□□□ 0.59
MUC1-220ENST00000498431 ZFP91Q96JP5 570 aaPredicted RBP18.72■□□□□ 0.59
MUC1-220ENST00000498431 PDCD2LQ9BRP1 358 aa18.72■□□□□ 0.59
MUC1-220ENST00000498431 C5orf42Q9H799 3197 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 EFCAB14O75071 495 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 GGPS1O95749 300 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 HOXA13P31271 388 aaPredicted RBP18.71■□□□□ 0.59
MUC1-220ENST00000498431 GHRHRQ02643 423 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 CELF3Q5SZQ8 465 aaKnown RBP18.71■□□□□ 0.59
MUC1-220ENST00000498431 DBF4BQ8NFT6 615 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 SPATA33Q96N06 139 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 OSBPL7Q9BZF2 842 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 HCN4Q9Y3Q4 1203 aa18.71■□□□□ 0.59
MUC1-220ENST00000498431 GPR37L1O60883 481 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 KCNA5P22460 613 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 SERINC5Q86VE9 423 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 MYOCDQ8IZQ8 938 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 FBXO22Q8NEZ5 403 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.7■□□□□ 0.58
MUC1-220ENST00000498431 C16orf70Q9BSU1 422 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 AMNQ9BXJ7 453 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 BCAS3Q9H6U6 928 aa18.7■□□□□ 0.58
MUC1-220ENST00000498431 WDFY4Q6ZS81 3184 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 PI4K2BG5E9Z4 385 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 PPFIA4O75335 1185 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 UBA1P22314 1058 aaKnown RBP18.69■□□□□ 0.58
MUC1-220ENST00000498431 THPOP40225 353 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
MUC1-220ENST00000498431 PGM5Q15124 567 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 SLC35G1Q2M3R5 365 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 LEXMQ3ZCV2 418 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 MTMR8Q96EF0 704 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 ARIH1Q9Y4X5 557 aaPredicted RBP18.69■□□□□ 0.58
MUC1-220ENST00000498431 INSL6Q9Y581 213 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 TRIOO75962 3097 aa18.69■□□□□ 0.58
MUC1-220ENST00000498431 RSPH10B2B2RC85 870 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 RSPH10BP0C881 870 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 IL9P15248 144 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 NT5C2P49902 561 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 PLEKHG4Q58EX7 1191 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 SP7Q8TDD2 431 aaPredicted RBP18.68■□□□□ 0.58
MUC1-220ENST00000498431 MAD2L2Q9UI95 211 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 PCDHA1Q9Y5I3 950 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 EMSYQ7Z589 1322 aa18.68■□□□□ 0.58
MUC1-220ENST00000498431 KLRF2D3W0D1 207 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 ZBTB5O15062 677 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 AMHP03971 560 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 HOXC8P31273 242 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 SEC23AQ15436 765 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 IMMTQ16891 758 aaKnown RBP18.67■□□□□ 0.58
MUC1-220ENST00000498431 IFIT1BQ5T764 474 aaKnown RBP18.67■□□□□ 0.58
MUC1-220ENST00000498431 SMC5Q8IY18 1101 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 ATP6V0A1Q93050 837 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 DSCC1Q9BVC3 393 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 IL25Q9H293 177 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 DIAPH3Q9NSV4 1193 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 DOCK5Q9H7D0 1870 aa18.67■□□□□ 0.58
MUC1-220ENST00000498431 C17orf102A2RUQ5 167 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 TREHO43280 583 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 SMIM10L2AP0DMW4 78 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 SMIM10L2BP0DMW5 78 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 EPC2Q52LR7 807 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 KCNV1Q6PIU1 500 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 CYB5R4Q7L1T6 521 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 GJD3Q8N144 294 aa18.66■□□□□ 0.58
MUC1-220ENST00000498431 MRPL38Q96DV4 380 aaKnown RBP18.66■□□□□ 0.58
MUC1-220ENST00000498431 KRT23Q9C075 422 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms