RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.22
CDK9-205ENST00000498339 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
CDK9-205ENST00000498339 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 RPAINQ86UA6 219 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 FBXO11Q86XK2 927 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 SEPT8Q92599 483 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 POP1Q99575 1024 aaKnown RBP13.65□□□□□ -0.22
CDK9-205ENST00000498339 UBA5Q9GZZ9 404 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 CPVLQ9H3G5 476 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 USP34Q70CQ2 3546 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 COL4A6Q14031 1691 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 POTEB3A0JP26 581 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 CTSHP09668 335 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 IRS1P35568 1242 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 HAND2P61296 217 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
CDK9-205ENST00000498339 POTEBQ6S5H4 581 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 MCF2L2Q86YR7 1114 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
CDK9-205ENST00000498339 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
CDK9-205ENST00000498339 TBC1D5Q92609 795 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 ANKS1AQ92625 1134 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 IWS1Q96ST2 819 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
CDK9-205ENST00000498339 DCTPP1Q9H773 170 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 MUTYHQ9UIF7 546 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
CDK9-205ENST00000498339 MYO7AQ13402 2215 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 LAMA4Q16363 1823 aa13.64□□□□□ -0.23
CDK9-205ENST00000498339 HAS3O00219 553 aa13.63□□□□□ -0.23
CDK9-205ENST00000498339 OTUD7AQ8TE49 926 aaPredicted RBP13.63□□□□□ -0.23
CDK9-205ENST00000498339 ATP6V0A1Q93050 837 aa13.63□□□□□ -0.23
CDK9-205ENST00000498339 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
CDK9-205ENST00000498339 SPATA33Q96N06 139 aa13.63□□□□□ -0.23
CDK9-205ENST00000498339 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
CDK9-205ENST00000498339 COL20A1Q9P218 1284 aa13.63□□□□□ -0.23
CDK9-205ENST00000498339 CCDC171Q6TFL3 1326 aa13.63□□□□□ -0.23
CDK9-205ENST00000498339 KIAA1671Q9BY89 1806 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 C17orf102A2RUQ5 167 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 EIF3JO75822 258 aaKnown RBP13.62□□□□□ -0.23
CDK9-205ENST00000498339 CFBP00751 764 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 MYCLP12524 364 aaPredicted RBP13.62□□□□□ -0.23
CDK9-205ENST00000498339 MX1P20591 662 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 SERINC5Q86VE9 423 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 FIBCD1Q8N539 461 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 PHOX2BQ99453 314 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
CDK9-205ENST00000498339 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
CDK9-205ENST00000498339 KMT2EQ8IZD2 1858 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 NCK2O43639 380 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 GGPS1O95749 300 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 NR3C2P08235 984 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 FGRP09769 529 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 SNHG28P0DPA3 235 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 HIC1Q14526 733 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 MFSD6Q6ZSS7 791 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 TOP1MTQ969P6 601 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 TTC14Q96N46 770 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 IGFLR1Q9H665 355 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
CDK9-205ENST00000498339 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
CDK9-205ENST00000498339 STXBP3O00186 592 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 MBTPS2O43462 519 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 FGAP02671 866 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
CDK9-205ENST00000498339 PTPN5P54829 565 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
CDK9-205ENST00000498339 ALX1Q15699 326 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 SMAD2Q15796 467 aaKnown RBP13.6□□□□□ -0.23
CDK9-205ENST00000498339 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 HSDL1Q3SXM5 330 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 HERC4Q5GLZ8 1057 aaPredicted RBP13.6□□□□□ -0.23
CDK9-205ENST00000498339 RNF135Q8IUD6 432 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 SUGP1Q8IWZ8 645 aaKnown RBP13.6□□□□□ -0.23
CDK9-205ENST00000498339 ADGRF4Q8IZF3 695 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 PNMA1Q8ND90 353 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 C11orf84Q9BUA3 381 aaPredicted RBP13.6□□□□□ -0.23
CDK9-205ENST00000498339 MAF1Q9H063 256 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 KAT14Q9H8E8 782 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 MLXIPQ9HAP2 919 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 VAT1LQ9HCJ6 419 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 HELLSQ9NRZ9 838 aa13.6□□□□□ -0.23
CDK9-205ENST00000498339 TECTAO75443 2155 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.59□□□□□ -0.23
CDK9-205ENST00000498339 NOP56O00567 594 aaKnown RBP13.59□□□□□ -0.23
CDK9-205ENST00000498339 TREHO43280 583 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 PPFIA4O75335 1185 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 SMIM10L2AP0DMW4 78 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 SMIM10L2BP0DMW5 78 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 NDUFV1P49821 464 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 DLX2Q07687 328 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms