RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ALG3Q92685 438 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 ALG1Q9BT22 464 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 RNF38Q9H0F5 515 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 PARD6AQ9NPB6 346 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 JAG2Q9Y219 1238 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 TRAF6Q9Y4K3 522 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 PCDHA5Q9Y5H7 936 aa4.3□□□□□ -1.72
RIF1-212ENST00000498041 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 HGSO14964 777 aaPredicted RBP4.29□□□□□ -1.72
RIF1-212ENST00000498041 BUB1BO60566 1050 aaPredicted RBP4.29□□□□□ -1.72
RIF1-212ENST00000498041 EFCAB14O75071 495 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 SOD2P04179 222 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 APPP05067 770 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 FBLN1P23142 703 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 GRK2P25098 689 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 GRK3P35626 688 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 NCKAP1LP55160 1127 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 EMC4Q5J8M3 183 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 STEAP3Q658P3 488 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 MILR1Q7Z6M3 343 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 MTDHQ86UE4 582 aaKnown RBP4.29□□□□□ -1.72
RIF1-212ENST00000498041 IGDCC3Q8IVU1 814 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.29□□□□□ -1.72
RIF1-212ENST00000498041 SIGLEC10Q96LC7 697 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 JAM3Q9BX67 310 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 MRPL4Q9BYD3 311 aaKnown RBP4.29□□□□□ -1.72
RIF1-212ENST00000498041 PPARGC1AQ9UBK2 798 aaKnown RBP4.29□□□□□ -1.72
RIF1-212ENST00000498041 RAPGEFL1Q9UHV5 662 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 PALD1Q9ULE6 856 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 CNOT6Q9ULM6 557 aaKnown RBP4.29□□□□□ -1.72
RIF1-212ENST00000498041 IRAK3Q9Y616 596 aa4.29□□□□□ -1.72
RIF1-212ENST00000498041 KRIT1O00522 736 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 IRS4O14654 1257 aaPredicted RBP4.28□□□□□ -1.72
RIF1-212ENST00000498041 FOXD2O60548 495 aaPredicted RBP4.28□□□□□ -1.72
RIF1-212ENST00000498041 MAFKO60675 156 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 TADA3O75528 432 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 ASGR2P07307 311 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 IGFBP6P24592 240 aaPredicted RBP4.28□□□□□ -1.72
RIF1-212ENST00000498041 PMLP29590 882 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 GUCY1A3Q02108 690 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 SPIRE1Q08AE8 756 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 PAK1Q13153 545 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 SQSTM1Q13501 440 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 TRIM61Q5EBN2 209 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 CYP4F22Q6NT55 531 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 CPA5Q8WXQ8 436 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 RNPC3Q96LT9 517 aaKnown RBP4.28□□□□□ -1.72
RIF1-212ENST00000498041 KCNJ15Q99712 375 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 SMOC1Q9H4F8 434 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 BCAS3Q9H6U6 928 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 IPPKQ9H8X2 491 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 KANSL2Q9H9L4 492 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 SLC52A2Q9HAB3 445 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 NCOA5Q9HCD5 579 aaKnown RBP4.28□□□□□ -1.72
RIF1-212ENST00000498041 SLC6A20Q9NP91 592 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 NDOR1Q9UHB4 597 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 ZNF652Q9Y2D9 606 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 KCTD3Q9Y597 815 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 PCDHA8Q9Y5H6 950 aa4.28□□□□□ -1.72
RIF1-212ENST00000498041 A0A0G2JLL6 359 aaPredicted RBP4.27□□□□□ -1.73
RIF1-212ENST00000498041 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.27□□□□□ -1.73
RIF1-212ENST00000498041 ARVCFO00192 962 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 RFXAPO00287 272 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 PLD2O14939 933 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 KCNQ2O43526 872 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 CRTAMO95727 393 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 GNAT1P11488 350 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 CACNB2Q08289 660 aaPredicted RBP4.27□□□□□ -1.73
RIF1-212ENST00000498041 SSPNQ14714 243 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 ZNF385BQ569K4 471 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 OTOP3Q7RTS5 596 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 NOP9Q86U38 636 aaKnown RBP4.27□□□□□ -1.73
RIF1-212ENST00000498041 TMEFF1Q8IYR6 380 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 GSTCDQ8NEC7 633 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 SLC7A14Q8TBB6 771 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 PIP4K2CQ8TBX8 421 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 PHOSPHO1Q8TCT1 267 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 MAGEB10Q96LZ2 347 aaPredicted RBP4.27□□□□□ -1.73
RIF1-212ENST00000498041 TMEM260Q9NX78 707 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 SFMBT1Q9UHJ3 866 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 FAN1Q9Y2M0 1017 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 PCDHB4Q9Y5E5 795 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 PCDHA9Q9Y5H5 950 aa4.27□□□□□ -1.73
RIF1-212ENST00000498041 TCRBV5S2A0A599 114 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 ESYT3A0FGR9 886 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 WNT9AO14904 365 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 GSTA4O15217 222 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 COL6A2P12110 1019 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 ATF2P15336 505 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 PI3P19957 117 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 FOXO4P98177 505 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 NFIXQ14938 502 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 FNDC3BQ53EP0 1204 aaKnown RBP4.26□□□□□ -1.73
RIF1-212ENST00000498041 CNKSR3Q6P9H4 555 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 ETV3LQ6ZN32 361 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 B3GNT8Q7Z7M8 397 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 HOMER1Q86YM7 354 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 MIB1Q86YT6 1006 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms