RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 KATNAL1Q9BW62 490 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 COL20A1Q9P218 1284 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 DDX41Q9UJV9 622 aaKnown RBP19.37■□□□□ 0.69
VIM-208ENST00000497849 ANAPC4Q9UJX5 808 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 ORC4O43929 436 aa19.36■□□□□ 0.69
VIM-208ENST00000497849 FGRP09769 529 aa19.36■□□□□ 0.69
VIM-208ENST00000497849 RNF135Q8IUD6 432 aa19.36■□□□□ 0.69
VIM-208ENST00000497849 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
VIM-208ENST00000497849 EMID1Q96A84 441 aaPredicted RBP19.36■□□□□ 0.69
VIM-208ENST00000497849 RSPH10B2B2RC85 870 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 MBTPS2O43462 519 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 ST18O60284 1047 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 RSPH10BP0C881 870 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 ZNF543Q08ER8 600 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 CLUL1Q15846 466 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 USH1GQ495M9 461 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 SYTL5Q8TDW5 730 aaPredicted RBP19.35■□□□□ 0.69
VIM-208ENST00000497849 GPATCH3Q96I76 525 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 YME1L1Q96TA2 773 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 OSBPL7Q9BZF2 842 aa19.35■□□□□ 0.69
VIM-208ENST00000497849 ZDBF2Q9HCK1 2354 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 UPP2O95045 317 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 SNHG28P0DPA3 235 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 THPOP40225 353 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 BMP8AQ7Z5Y6 402 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 SERINC5Q86VE9 423 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 NSUN6Q8TEA1 469 aaKnown RBP19.34■□□□□ 0.69
VIM-208ENST00000497849 EDAQ92838 391 aa19.34■□□□□ 0.69
VIM-208ENST00000497849 KMT2EQ8IZD2 1858 aa19.33■□□□□ 0.69
VIM-208ENST00000497849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.33■□□□□ 0.68
VIM-208ENST00000497849 NCK2O43639 380 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 HOXD8P13378 290 aaPredicted RBP19.33■□□□□ 0.68
VIM-208ENST00000497849 PTPN5P54829 565 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 HYAL1Q12794 435 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 TCF15Q12870 199 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 STXBP2Q15833 593 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 VPS53Q5VIR6 699 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 PPTC7Q8NI37 304 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 POP1Q99575 1024 aaKnown RBP19.33■□□□□ 0.68
VIM-208ENST00000497849 TCP11L1Q9NUJ3 509 aa19.33■□□□□ 0.68
VIM-208ENST00000497849 CACNA1HO95180 2353 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 ZFHX2Q9C0A1 2572 aaPredicted RBP19.32■□□□□ 0.68
VIM-208ENST00000497849 LINC00271P0C7V0 271 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 LAMC2Q13753 1193 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 DHX37Q8IY37 1157 aaKnown RBP19.32■□□□□ 0.68
VIM-208ENST00000497849 PI4K2BQ8TCG2 481 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 IWS1Q96ST2 819 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 RMDN3Q96TC7 470 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 FSD1Q9BTV5 496 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 CPVLQ9H3G5 476 aa19.32■□□□□ 0.68
VIM-208ENST00000497849 TBX10O75333 385 aa19.31■□□□□ 0.68
VIM-208ENST00000497849 SEPT8Q92599 483 aa19.31■□□□□ 0.68
VIM-208ENST00000497849 MAF1Q9H063 256 aa19.31■□□□□ 0.68
VIM-208ENST00000497849 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
VIM-208ENST00000497849 TOMM22Q9NS69 142 aa19.31■□□□□ 0.68
VIM-208ENST00000497849 SPTBN4Q9H254 2564 aa19.31■□□□□ 0.68
VIM-208ENST00000497849 C5orf67F2Z3F1 127 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 GRM6O15303 877 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 EIF3JO75822 258 aaKnown RBP19.3■□□□□ 0.68
VIM-208ENST00000497849 GOLGA8HP0CJ92 632 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 GTF2F1P35269 517 aaKnown RBP eCLIP19.3■□□□□ 0.68
VIM-208ENST00000497849 SMAD4Q13485 552 aaKnown RBP19.3■□□□□ 0.68
VIM-208ENST00000497849 RRP12Q5JTH9 1297 aaKnown RBP19.3■□□□□ 0.68
VIM-208ENST00000497849 TRIM67Q6ZTA4 783 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 PBXIP1Q96AQ6 731 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 UBA5Q9GZZ9 404 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 DCTPP1Q9H773 170 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 ALG13Q9NP73 1137 aaKnown RBP19.3■□□□□ 0.68
VIM-208ENST00000497849 MRVI1Q9Y6F6 885 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 MYO15AQ9UKN7 3530 aa19.3■□□□□ 0.68
VIM-208ENST00000497849 MYH6P13533 1939 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 TMEM221A6NGB7 291 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 M0R296 226 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 STXBP3O00186 592 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 LINC01565O15544 149 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 PPFIA4O75335 1185 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 EIF2AK2P19525 551 aaKnown RBP19.29■□□□□ 0.68
VIM-208ENST00000497849 HOXC8P31273 242 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 CTNNB1P35222 781 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 HSDL1Q3SXM5 330 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 MYSM1Q5VVJ2 828 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 C16orf70Q9BSU1 422 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 IFIH1Q9BYX4 1025 aaKnown RBP19.29■□□□□ 0.68
VIM-208ENST00000497849 LMAN2LQ9H0V9 348 aa19.29■□□□□ 0.68
VIM-208ENST00000497849 ABCB11O95342 1321 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 TTC41PQ6P2S7 1318 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 RGS20O76081 388 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 RB1P06400 928 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 NR3C2P08235 984 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
VIM-208ENST00000497849 ARHGEF16Q5VV41 709 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 ATP6V0A1Q93050 837 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 TTC14Q96N46 770 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 PRRX2Q99811 253 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 CD207Q9UJ71 328 aa19.28■□□□□ 0.68
VIM-208ENST00000497849 C17orf102A2RUQ5 167 aa19.27■□□□□ 0.68
VIM-208ENST00000497849 TREHO43280 583 aa19.27■□□□□ 0.68
VIM-208ENST00000497849 SORBS3O60504 671 aa19.27■□□□□ 0.68
VIM-208ENST00000497849 CTSHP09668 335 aa19.27■□□□□ 0.68
VIM-208ENST00000497849 BMPR1AP36894 532 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms