RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 HOXD8P13378 290 aaPredicted RBP25.35■■□□□ 1.65
CLIC4-204ENST00000497755 GHRHRQ02643 423 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 MYSM1Q5VVJ2 828 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 PLEKHM2Q8IWE5 1019 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 STAG2Q8N3U4 1231 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 TGS1Q96RS0 853 aaKnown RBP25.35■■□□□ 1.65
CLIC4-204ENST00000497755 LRFN3Q9BTN0 628 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 MTUS1Q9ULD2 1270 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 LAMA4Q16363 1823 aa25.35■■□□□ 1.65
CLIC4-204ENST00000497755 EFCAB14O75071 495 aa25.34■■□□□ 1.65
CLIC4-204ENST00000497755 B4GALNT3Q6L9W6 998 aa25.34■■□□□ 1.65
CLIC4-204ENST00000497755 SMC5Q8IY18 1101 aa25.34■■□□□ 1.65
CLIC4-204ENST00000497755 KHSRPQ92945 711 aaKnown RBP eCLIP25.34■■□□□ 1.652e-6■□□□□ 8.4
CLIC4-204ENST00000497755 AMNQ9BXJ7 453 aa25.34■■□□□ 1.65
CLIC4-204ENST00000497755 OSBPL3Q9H4L5 887 aa25.34■■□□□ 1.65
CLIC4-204ENST00000497755 PPP1R11O60927 126 aaPredicted RBP25.33■■□□□ 1.65
CLIC4-204ENST00000497755 HSDL1Q3SXM5 330 aa25.33■■□□□ 1.65
CLIC4-204ENST00000497755 FAM117BQ6P1L5 589 aa25.33■■□□□ 1.65
CLIC4-204ENST00000497755 STOX1Q6ZVD7 989 aa25.33■■□□□ 1.65
CLIC4-204ENST00000497755 PDCD2LQ9BRP1 358 aa25.33■■□□□ 1.65
CLIC4-204ENST00000497755 DSCC1Q9BVC3 393 aa25.33■■□□□ 1.65
CLIC4-204ENST00000497755 MYCLP12524 364 aaPredicted RBP25.32■■□□□ 1.64
CLIC4-204ENST00000497755 SP2Q02086 613 aa25.32■■□□□ 1.64
CLIC4-204ENST00000497755 CELF3Q5SZQ8 465 aaKnown RBP25.32■■□□□ 1.64
CLIC4-204ENST00000497755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.32■■□□□ 1.64
CLIC4-204ENST00000497755 VSIG10LQ86VR7 867 aa25.32■■□□□ 1.64
CLIC4-204ENST00000497755 MTMR8Q96EF0 704 aa25.32■■□□□ 1.64
CLIC4-204ENST00000497755 MAP3K20Q9NYL2 800 aaKnown RBP25.32■■□□□ 1.64
CLIC4-204ENST00000497755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.31■■□□□ 1.64
CLIC4-204ENST00000497755 KLRF2D3W0D1 207 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 SORBS3O60504 671 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 LGR5O75473 907 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 MKRN4PQ13434 485 aaPredicted RBP25.31■■□□□ 1.64
CLIC4-204ENST00000497755 IMMTQ16891 758 aaKnown RBP25.31■■□□□ 1.64
CLIC4-204ENST00000497755 KCNV1Q6PIU1 500 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 CHD1LQ86WJ1 897 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 SPATA33Q96N06 139 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 C16orf70Q9BSU1 422 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 KRT23Q9C075 422 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 CD320Q9NPF0 282 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 DIAPH3Q9NSV4 1193 aa25.31■■□□□ 1.64
CLIC4-204ENST00000497755 BAZ2BQ9UIF8 2168 aaKnown RBP25.3■■□□□ 1.64
CLIC4-204ENST00000497755 HOXA13P31271 388 aaPredicted RBP25.3■■□□□ 1.64
CLIC4-204ENST00000497755 SERINC5Q86VE9 423 aa25.3■■□□□ 1.64
CLIC4-204ENST00000497755 DBF4BQ8NFT6 615 aa25.3■■□□□ 1.64
CLIC4-204ENST00000497755 UBAC1Q9BSL1 405 aa25.3■■□□□ 1.64
CLIC4-204ENST00000497755 INSL6Q9Y581 213 aa25.3■■□□□ 1.64
CLIC4-204ENST00000497755 PCDHA1Q9Y5I3 950 aa25.3■■□□□ 1.64
CLIC4-204ENST00000497755 SIP14410 1827 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 ZBTB5O15062 677 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 GGPS1O95749 300 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 PGM5Q15124 567 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 SEC23AQ15436 765 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 IFIT1BQ5T764 474 aaKnown RBP25.29■■□□□ 1.64
CLIC4-204ENST00000497755 IL31RAQ8NI17 732 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 ZFP91Q96JP5 570 aaPredicted RBP25.29■■□□□ 1.64
CLIC4-204ENST00000497755 CTNNA3Q9UI47 895 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 MAD2L2Q9UI95 211 aa25.29■■□□□ 1.64
CLIC4-204ENST00000497755 RSPH10B2B2RC85 870 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 RSPH10BP0C881 870 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 TGFB3P10600 412 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 THPOP40225 353 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 NUCB1Q02818 461 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 TMEM31Q5JXX7 168 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 SAMD3Q8N6K7 520 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 GPKOWQ92917 476 aaPredicted RBP eCLIP25.28■■□□□ 1.64
CLIC4-204ENST00000497755 C17orf80Q9BSJ5 609 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 RWDD1Q9H446 243 aaPredicted RBP25.28■■□□□ 1.64
CLIC4-204ENST00000497755 UBE2ZQ9H832 354 aaPredicted RBP25.28■■□□□ 1.64
CLIC4-204ENST00000497755 CNNM2Q9H8M5 875 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 C11orf16Q9NQ32 467 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 ARIH1Q9Y4X5 557 aaPredicted RBP25.28■■□□□ 1.64
CLIC4-204ENST00000497755 EMSYQ7Z589 1322 aa25.28■■□□□ 1.64
CLIC4-204ENST00000497755 MICAL3Q7RTP6 2002 aa25.27■■□□□ 1.64
CLIC4-204ENST00000497755 PALM3A6NDB9 673 aaPredicted RBP25.27■■□□□ 1.64
CLIC4-204ENST00000497755 HIP1O00291 1037 aa25.27■■□□□ 1.64
CLIC4-204ENST00000497755 IGHDP01880 384 aa25.27■■□□□ 1.64
CLIC4-204ENST00000497755 UBA1P22314 1058 aaKnown RBP25.27■■□□□ 1.64
CLIC4-204ENST00000497755 HTRA4P83105 476 aaPredicted RBP25.27■■□□□ 1.64
CLIC4-204ENST00000497755 SLC35G1Q2M3R5 365 aa25.27■■□□□ 1.64
CLIC4-204ENST00000497755 PLEKHG4Q58EX7 1191 aa25.27■■□□□ 1.64
CLIC4-204ENST00000497755 BCAS3Q9H6U6 928 aa25.27■■□□□ 1.64
CLIC4-204ENST00000497755 GPR37L1O60883 481 aa25.26■■□□□ 1.63
CLIC4-204ENST00000497755 AMHP03971 560 aa25.26■■□□□ 1.63
CLIC4-204ENST00000497755 HOXC8P31273 242 aa25.26■■□□□ 1.63
CLIC4-204ENST00000497755 CYB5R4Q7L1T6 521 aa25.26■■□□□ 1.63
CLIC4-204ENST00000497755 C17orf102A2RUQ5 167 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 PI4K2BG5E9Z4 385 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 H3BRB1 525 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 LEXMQ3ZCV2 418 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 MYOCDQ8IZQ8 938 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 FBXO22Q8NEZ5 403 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.25■■□□□ 1.63
CLIC4-204ENST00000497755 SP7Q8TDD2 431 aaPredicted RBP25.25■■□□□ 1.63
CLIC4-204ENST00000497755 ATP6V0A1Q93050 837 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 OSBPL7Q9BZF2 842 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 IL25Q9H293 177 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 TUT1Q9H6E5 874 aaKnown RBP25.25■■□□□ 1.63
CLIC4-204ENST00000497755 MLXIPQ9HAP2 919 aa25.25■■□□□ 1.63
CLIC4-204ENST00000497755 MYO7AQ13402 2215 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms