RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 USP11P51784 963 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 CACNB2Q08289 660 aaPredicted RBP22.8■■□□□ 1.24
CTSD-206ENST00000497544 TRIM32Q13049 653 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 ACVR2BQ13705 512 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 INF2Q27J81 1249 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 MAFAQ8NHW3 353 aaPredicted RBP22.8■■□□□ 1.24
CTSD-206ENST00000497544 FAM122AQ96E09 287 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 ZFP91Q96JP5 570 aaPredicted RBP22.8■■□□□ 1.24
CTSD-206ENST00000497544 VTA1Q9NP79 307 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 RTEL1Q9NZ71 1219 aa22.8■■□□□ 1.24
CTSD-206ENST00000497544 CYP3A4P08684 503 aa22.79■■□□□ 1.24
CTSD-206ENST00000497544 MRPS9P82933 396 aaKnown RBP22.79■■□□□ 1.24
CTSD-206ENST00000497544 EARS2Q5JPH6 523 aaKnown RBP22.79■■□□□ 1.24
CTSD-206ENST00000497544 NLRX1Q86UT6 975 aa22.79■■□□□ 1.24
CTSD-206ENST00000497544 NOSTRINQ8IVI9 506 aa22.79■■□□□ 1.24
CTSD-206ENST00000497544 SYMPKQ92797 1274 aaKnown RBP22.79■■□□□ 1.24
CTSD-206ENST00000497544 NRBP1Q9UHY1 535 aa22.79■■□□□ 1.24
CTSD-206ENST00000497544 ZHX1Q9UKY1 873 aaPredicted RBP22.79■■□□□ 1.24
CTSD-206ENST00000497544 CDH23Q9H251 3354 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 KIF28PB7ZC32 967 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 PRKAR2AP13861 404 aaKnown RBP22.78■■□□□ 1.24
CTSD-206ENST00000497544 CNGA1P29973 690 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 GNPTABQ3T906 1256 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 SEPT14Q6ZU15 432 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 NEK8Q86SG6 692 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 FBXO16Q8IX29 292 aaPredicted RBP22.78■■□□□ 1.24
CTSD-206ENST00000497544 MTMR6Q9Y217 621 aa22.78■■□□□ 1.24
CTSD-206ENST00000497544 CRYGNQ8WXF5 182 aa22.77■■□□□ 1.24
CTSD-206ENST00000497544 MXRA8Q9BRK3 442 aa22.77■■□□□ 1.24
CTSD-206ENST00000497544 HMX1Q9NP08 348 aaPredicted RBP22.77■■□□□ 1.24
CTSD-206ENST00000497544 NOL7Q9UMY1 257 aaKnown RBP22.77■■□□□ 1.24
CTSD-206ENST00000497544 FAM205CA6NFA0 338 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 ZNF865P0CJ78 1059 aaPredicted RBP22.76■■□□□ 1.23
CTSD-206ENST00000497544 CYBAP13498 195 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 HOXD11P31277 338 aaPredicted RBP22.76■■□□□ 1.23
CTSD-206ENST00000497544 LETM2Q2VYF4 491 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 IQSEC1Q6DN90 963 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 FERMT3Q86UX7 667 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 CDX2Q99626 313 aaPredicted RBP22.76■■□□□ 1.23
CTSD-206ENST00000497544 NAP1L4Q99733 375 aaKnown RBP22.76■■□□□ 1.23
CTSD-206ENST00000497544 KATNBL1Q9H079 304 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 PDGFCQ9NRA1 345 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 FAM184BQ9ULE4 1060 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 UBIAD1Q9Y5Z9 338 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 KIAA1217Q5T5P2 1943 aa22.76■■□□□ 1.23
CTSD-206ENST00000497544 ATP2B1P20020 1258 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 CIITAP33076 1130 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 CCDC144BQ3MJ40 725 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 CEP55Q53EZ4 464 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 MAP3K21Q5TCX8 1036 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 TAPT1Q6NXT6 567 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 BRAPQ7Z569 592 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 ANKLE1Q8NAG6 615 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 TRPV1Q8NER1 839 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 SCFD2Q8WU76 684 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 IPO9Q96P70 1041 aaKnown RBP22.75■■□□□ 1.23
CTSD-206ENST00000497544 INPP4AQ96PE3 977 aaPredicted RBP22.75■■□□□ 1.23
CTSD-206ENST00000497544 JADE2Q9NQC1 790 aa22.75■■□□□ 1.23
CTSD-206ENST00000497544 TNFRSF10AO00220 468 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 MAFGO15525 162 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 ITGB5P18084 799 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 CCND3P30281 292 aaPredicted RBP22.74■■□□□ 1.23
CTSD-206ENST00000497544 TTLL4Q14679 1199 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 ZNF697Q5TEC3 545 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 KCNV1Q6PIU1 500 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 MOXD1Q6UVY6 613 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 PLA2G4DQ86XP0 818 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 GPRASP2Q96D09 838 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 CDHR1Q96JP9 859 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 WDR11Q9BZH6 1224 aa22.74■■□□□ 1.23
CTSD-206ENST00000497544 ZSCAN16Q9H4T2 348 aaPredicted RBP22.74■■□□□ 1.23
CTSD-206ENST00000497544 RBM47A0AV96 593 aaKnown RBP22.73■■□□□ 1.23
CTSD-206ENST00000497544 MEIS1O00470 390 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 FIBPO43427 364 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 EDIL3O43854 480 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 CCNT1O60563 726 aaKnown RBP22.73■■□□□ 1.23
CTSD-206ENST00000497544 RGS20O76081 388 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 ZSCAN22P10073 491 aaPredicted RBP22.73■■□□□ 1.23
CTSD-206ENST00000497544 TGFB3P10600 412 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 AKR1A1P14550 325 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 GCFC2P16383 781 aaKnown RBP22.73■■□□□ 1.23
CTSD-206ENST00000497544 ADCYAP1R1P41586 468 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 PRR16Q569H4 304 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 FOXD4L5Q5VV16 416 aaPredicted RBP22.73■■□□□ 1.23
CTSD-206ENST00000497544 NIPA1Q7RTP0 329 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 CYP2W1Q8TAV3 490 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 FOXD4L4Q8WXT5 416 aaPredicted RBP22.73■■□□□ 1.23
CTSD-206ENST00000497544 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.73■■□□□ 1.233e-9■■■■□ 20.4
CTSD-206ENST00000497544 MRVI1Q9Y6F6 885 aa22.73■■□□□ 1.23
CTSD-206ENST00000497544 FAM86B1E9PN63 330 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 SEPT4O43236 478 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 FAM86B2P0C5J1 330 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 TXNP10599 105 aaKnown RBP22.72■■□□□ 1.23
CTSD-206ENST00000497544 ICAM3P32942 547 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 TRAPPC10P48553 1259 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 TNFAIP2Q03169 654 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 MTMR1Q13613 665 aa22.72■■□□□ 1.23
CTSD-206ENST00000497544 DDX25Q9UHL0 483 aaKnown RBP22.72■■□□□ 1.23
CTSD-206ENST00000497544 CYP3A7-CYP3A51PA0A087WV96 503 aa22.71■■□□□ 1.23
CTSD-206ENST00000497544 SPATA31C2B4DYI2 1134 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms