RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 GOPCQ9HD26 462 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 KCNMB3Q9NPA1 279 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 PCDHA1Q9Y5I3 950 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 MEIS2O14770 477 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 TBX3O15119 743 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 CCP110O43303 1012 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 TDP2O95551 362 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 CASP1P29466 404 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 AMPD3Q01432 767 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 PAK1Q13153 545 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 GRB10Q13322 594 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 ARMCX6Q7L4S7 300 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 DRC1Q96MC2 740 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 DEFB129Q9H1M3 183 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
SNRNP200-208ENST00000497539 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 TFRCP02786 760 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 UBE2SQ16763 222 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 Q4G0T1 1027 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 HAS1Q92839 578 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 PNMA5Q96PV4 448 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 TRIM9Q9C026 710 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 ARHGAP6O43182 974 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 CYP3A4P08684 503 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 CIITAP33076 1130 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 TNNI2P48788 182 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 NOC3LQ8WTT2 800 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 RANBP17Q9H2T7 1088 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 LZTFL1Q9NQ48 299 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 SAMSN1Q9NSI8 373 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 STK24Q9Y6E0 443 aa12.87□□□□□ -0.35
SNRNP200-208ENST00000497539 PVALEFA0A1B0GWK0 134 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 NFKBIEO00221 500 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 TUBB4AP04350 444 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 CDC25AP30304 524 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 SREBF1P36956 1147 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 TECP42680 631 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 TC2NQ8N9U0 490 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 BLOC1S4Q9NUP1 217 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 KDM3AQ9Y4C1 1321 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 CLRN2A0PK11 232 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 CAP2P40123 477 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 FAM160B2Q86V87 743 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
SNRNP200-208ENST00000497539 H0YHG0 523 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 H7C1D1 291 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 WNT10BO00744 389 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 MRFAP1Q9Y605 127 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 H3BQF6 201 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 OPLAHO14841 1288 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 TXKP42681 527 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 PRCPP42785 496 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 PPP2R5AQ15172 486 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 RAD54LQ92698 747 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 SOWAHDA6NJG2 315 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 FECHP22830 423 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 LMAN1P49257 510 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 STAT2P52630 851 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 GHRHRQ02643 423 aa12.85□□□□□ -0.35
SNRNP200-208ENST00000497539 EHHADHQ08426 723 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms