RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 MAFGO15525 162 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 CASTP20810 708 aaKnown RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 UBA1P22314 1058 aaKnown RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 PDIA3P30101 505 aaKnown RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 ANAPC15P60006 121 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 RBL2Q08999 1139 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 HSDL1Q3SXM5 330 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 FCHSD1Q86WN1 690 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 BRF1Q92994 677 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 ZNF274Q96GC6 653 aaPredicted RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 TRPV6Q9H1D0 765 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 BCAS3Q9H6U6 928 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 UBIAD1Q9Y5Z9 338 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
SHROOM3-210ENST00000497440 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 STXBP3O00186 592 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 PRPF3O43395 683 aaKnown RBP12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 FIBPO43427 364 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 IFNAR1P17181 557 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 ITGB5P18084 799 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 DGKDQ16760 1214 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 VTI1AQ96AJ9 217 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 ZMYND12Q9H0C1 365 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 WNT8AQ9H1J5 351 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 TRANK1O15050 2925 aa12.54□□□□□ -0.4
SHROOM3-210ENST00000497440 VCANP13611 3396 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 FOSP01100 380 aaPredicted RBP12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 MYL3P08590 195 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 FPGSQ05932 587 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 NEDD9Q14511 834 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 TMEM240Q5SV17 173 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 DHX37Q8IY37 1157 aaKnown RBP12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 SMARCC2Q8TAQ2 1214 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 CUL5Q93034 780 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 GPRASP2Q96D09 838 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 RNF26Q9BY78 433 aaPredicted RBP12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 TRMT13Q9NUP7 481 aaKnown RBP12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
SHROOM3-210ENST00000497440 EDIL3O43854 480 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 ATP9AO75110 1047 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 GGPS1O95749 300 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 KCNA2P16389 499 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 METAP2P50579 478 aaKnown RBP eCLIP12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 GPNMBQ14956 572 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 GPR20Q99678 358 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 JADE2Q9NQC1 790 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 GTF2IRD1Q9UHL9 959 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 CYP46A1Q9Y6A2 500 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 TET1Q8NFU7 2136 aa12.52□□□□□ -0.41
SHROOM3-210ENST00000497440 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 MEIS1O00470 390 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 ADAMTS3O15072 1205 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 CYP3A4P08684 503 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 SCG2P13521 617 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 CSF2RAP15509 400 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 CYP2C18P33260 490 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 SREBF1P36956 1147 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 ADAM17P78536 824 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 AP3B2Q13367 1082 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 PPIGQ13427 754 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 HIC1Q14526 733 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 UBE2SQ16763 222 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 TRIM71Q2Q1W2 868 aaKnown RBP12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 FAM177A1Q8N128 213 aaPredicted RBP12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 TMEM199Q8N511 208 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 GIMAP8Q8ND71 665 aaPredicted RBP12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 TELO2Q9Y4R8 837 aa12.51□□□□□ -0.41
SHROOM3-210ENST00000497440 PSEN2P49810 448 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms