RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 NFRKBQ6P4R8 1299 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 RTEL1Q9NZ71 1219 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 PRPF3O43395 683 aaKnown RBP21.45■■□□□ 1.02
RPN1-208ENST00000497415 ANAPC15P60006 121 aa21.45■■□□□ 1.02
RPN1-208ENST00000497415 FPGSQ05932 587 aa21.45■■□□□ 1.02
RPN1-208ENST00000497415 PTPN11Q06124 597 aaPredicted RBP21.45■■□□□ 1.02
RPN1-208ENST00000497415 KAT2BQ92831 832 aa21.45■■□□□ 1.02
RPN1-208ENST00000497415 UPF3BQ9BZI7 483 aaKnown RBP21.45■■□□□ 1.02
RPN1-208ENST00000497415 TRPV6Q9H1D0 765 aa21.45■■□□□ 1.02
RPN1-208ENST00000497415 PCDHA6Q9UN73 950 aa21.45■■□□□ 1.02
RPN1-208ENST00000497415 PCDHA8Q9Y5H6 950 aa21.45■■□□□ 1.02
RPN1-208ENST00000497415 SPDYE3A6NKU9 549 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 FIBPO43427 364 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
RPN1-208ENST00000497415 PPFIA4O75335 1185 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 PKN1Q16512 942 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 HSDL1Q3SXM5 330 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 IL17RAQ96F46 866 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 ZNF274Q96GC6 653 aaPredicted RBP21.44■■□□□ 1.02
RPN1-208ENST00000497415 GLT8D2Q9H1C3 349 aa21.44■■□□□ 1.02
RPN1-208ENST00000497415 SMCO2A6NFE2 343 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 SUPT20HL2P0C7V6 817 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 SCG2P13521 617 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 IFNAR1P17181 557 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 ADCY7P51828 1080 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 EPHB4P54760 987 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 NEDD9Q14511 834 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 SHHQ15465 462 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 C9orf50Q5SZB4 431 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 NLRX1Q86UT6 975 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 SPATA33Q96N06 139 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 SENP7Q9BQF6 1050 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 RNF26Q9BY78 433 aaPredicted RBP21.43■■□□□ 1.02
RPN1-208ENST00000497415 PPP1R12CQ9BZL4 782 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 BCAS3Q9H6U6 928 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 MLXIPQ9HAP2 919 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 PDRG1Q9NUG6 133 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 TRMT13Q9NUP7 481 aaKnown RBP21.43■■□□□ 1.02
RPN1-208ENST00000497415 DOCK5Q9H7D0 1870 aa21.43■■□□□ 1.02
RPN1-208ENST00000497415 HAS3O00219 553 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 FOSP01100 380 aaPredicted RBP21.42■■□□□ 1.02
RPN1-208ENST00000497415 CLK2P49760 499 aaKnown RBP21.42■■□□□ 1.02
RPN1-208ENST00000497415 CCT2P78371 535 aaKnown RBP21.42■■□□□ 1.02
RPN1-208ENST00000497415 SESTD1Q86VW0 696 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 PHKBQ93100 1093 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 GPRASP2Q96D09 838 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 LRCH3Q96II8 777 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 NOC4LQ9BVI4 516 aaKnown RBP21.42■■□□□ 1.02
RPN1-208ENST00000497415 HIPK3Q9H422 1215 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 EHMT1Q9H9B1 1298 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 UBIAD1Q9Y5Z9 338 aa21.42■■□□□ 1.02
RPN1-208ENST00000497415 ESYT2A0FGR8 921 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 F2P00734 622 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 ITGB5P18084 799 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 CYP2C18P33260 490 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 METTL7BQ6UX53 244 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 TMEM199Q8N511 208 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 ZMYND12Q9H0C1 365 aa21.41■■□□□ 1.02
RPN1-208ENST00000497415 NCOA5Q9HCD5 579 aaKnown RBP21.41■■□□□ 1.02
RPN1-208ENST00000497415 UMODL1Q5DID0 1318 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 SORBS3O60504 671 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 PSEN2P49810 448 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 AP3B2Q13367 1082 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 PPIGQ13427 754 aaKnown RBP eCLIP21.4■■□□□ 1.02
RPN1-208ENST00000497415 FAM47CQ5HY64 1035 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 GPR153Q6NV75 609 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 CYFIP1Q7L576 1253 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 PPP1R13LQ8WUF5 828 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 CDHR1Q96JP9 859 aa21.4■■□□□ 1.02
RPN1-208ENST00000497415 MAFGO15525 162 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 CYP2C9P11712 490 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 CSF2RAP15509 400 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 AKAP17AQ02040 695 aaKnown RBP21.39■■□□□ 1.01
RPN1-208ENST00000497415 C16orf59Q7L2K0 433 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 GIMAP8Q8ND71 665 aaPredicted RBP21.39■■□□□ 1.01
RPN1-208ENST00000497415 CCDC12Q8WUD4 166 aaPredicted RBP21.39■■□□□ 1.01
RPN1-208ENST00000497415 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.01
RPN1-208ENST00000497415 C16orf70Q9BSU1 422 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 ANO3Q9BYT9 981 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 JADE2Q9NQC1 790 aa21.39■■□□□ 1.01
RPN1-208ENST00000497415 ATP9AO75110 1047 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 SEC24BO95487 1268 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 ZNF286BP0CG31 522 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 KCNA2P16389 499 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 MFSD10Q14728 455 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 GPR20Q99678 358 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 SLC26A6Q9BXS9 759 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 WNT8AQ9H1J5 351 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 TMEM260Q9NX78 707 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 GTF2IRD1Q9UHL9 959 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 LAMA3Q16787 3333 aa21.38■■□□□ 1.01
RPN1-208ENST00000497415 SREBF1P36956 1147 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 KIAA0753Q2KHM9 967 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 GDF6Q6KF10 455 aaPredicted RBP21.37■■□□□ 1.01
RPN1-208ENST00000497415 PGBD1Q96JS3 809 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 CTAGE1Q96RT6 745 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.37■■□□□ 1.015e-9■■□□□ 12.2
RPN1-208ENST00000497415 MXRA8Q9BRK3 442 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 ALG1Q9BT22 464 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms