RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 DGKIO75912 1065 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 CELA3BP08861 270 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 LONRF2Q1L5Z9 754 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 STYK1Q6J9G0 422 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 NSMFQ6X4W1 530 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 FAM126BQ8IXS8 530 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 TP53I13Q8NBR0 393 aaPredicted RBP6.61□□□□□ -1.35
TRIM4-205ENST00000496896 SMARCC2Q8TAQ2 1214 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 CLDND1Q9NY35 253 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 PPP1R1BQ9UD71 204 aaPredicted RBP6.61□□□□□ -1.35
TRIM4-205ENST00000496896 PALD1Q9ULE6 856 aa6.61□□□□□ -1.35
TRIM4-205ENST00000496896 PRODHO43272 600 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 ADCY3O60266 1144 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 TADA3O75528 432 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 SASH1O94885 1247 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 CYP2C8P10632 490 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 GTF2F1P35269 517 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRIM4-205ENST00000496896 DLX2Q07687 328 aaPredicted RBP6.6□□□□□ -1.35
TRIM4-205ENST00000496896 MTERF2Q49AM1 385 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 USP53Q70EK8 1073 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 MILR1Q7Z6M3 343 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
TRIM4-205ENST00000496896 PHOSPHO1Q8TCT1 267 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.6□□□□□ -1.35
TRIM4-205ENST00000496896 PHF20Q9BVI0 1012 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
TRIM4-205ENST00000496896 MAFKO60675 156 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 C8BP07358 591 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 IFRD2Q12894 506 aaPredicted RBP6.59□□□□□ -1.35
TRIM4-205ENST00000496896 NTRK3Q16288 839 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 KIZQ2M2Z5 673 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 STEAP3Q658P3 488 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 LBX2Q6XYB7 198 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 SPATC1Q76KD6 591 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 SCUBE1Q8IWY4 988 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRIM4-205ENST00000496896 MKL1Q969V6 931 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 CHAMP1Q96JM3 812 aa6.59□□□□□ -1.35
TRIM4-205ENST00000496896 GPR85P60893 370 aa6.58□□□□□ -1.36
TRIM4-205ENST00000496896 RASA3Q14644 834 aa6.58□□□□□ -1.36
TRIM4-205ENST00000496896 ZC3H12BQ5HYM0 836 aaKnown RBP6.58□□□□□ -1.36
TRIM4-205ENST00000496896 LIPIQ6XZB0 460 aa6.58□□□□□ -1.36
TRIM4-205ENST00000496896 ZBTB38Q8NAP3 1195 aaPredicted RBP6.58□□□□□ -1.36
TRIM4-205ENST00000496896 PDGFDQ9GZP0 370 aaPredicted RBP6.58□□□□□ -1.36
TRIM4-205ENST00000496896 XYLT2Q9H1B5 865 aa6.58□□□□□ -1.36
TRIM4-205ENST00000496896 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
TRIM4-205ENST00000496896 HSPBP1Q9NZL4 362 aa6.58□□□□□ -1.36
TRIM4-205ENST00000496896 TCRBV5S2A0A599 114 aa6.57□□□□□ -1.36
TRIM4-205ENST00000496896 KRIT1O00522 736 aa6.57□□□□□ -1.36
TRIM4-205ENST00000496896 MSCO60682 206 aa6.57□□□□□ -1.36
TRIM4-205ENST00000496896 SSRP1Q08945 709 aaKnown RBP6.57□□□□□ -1.36
TRIM4-205ENST00000496896 YOD1Q5VVQ6 348 aaPredicted RBP6.57□□□□□ -1.36
TRIM4-205ENST00000496896 MAMDC2Q7Z304 686 aaPredicted RBP6.57□□□□□ -1.36
TRIM4-205ENST00000496896 IFNL3Q8IZI9 196 aa6.57□□□□□ -1.36
TRIM4-205ENST00000496896 SLC6A20Q9NP91 592 aa6.57□□□□□ -1.36
TRIM4-205ENST00000496896 PCDHB4Q9Y5E5 795 aa6.57□□□□□ -1.36
TRIM4-205ENST00000496896 SLURP1P55000 103 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 VMACQ2NL98 169 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 TRIM48Q8IWZ4 208 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 TTLL6Q8N841 843 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 KYQ8NBH2 561 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 TTLL11Q8NHH1 800 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 DEPDC7Q96QD5 511 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 C11orf84Q9BUA3 381 aaPredicted RBP6.56□□□□□ -1.36
TRIM4-205ENST00000496896 NTMQ9P121 344 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 NUB1Q9Y5A7 615 aa6.56□□□□□ -1.36
TRIM4-205ENST00000496896 GRK2P25098 689 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 GRK3P35626 688 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 KCNC1P48547 511 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 SUMO1P63165 101 aaKnown RBP6.55□□□□□ -1.36
TRIM4-205ENST00000496896 NKX3-2P78367 333 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 ZXDCQ2QGD7 858 aaPredicted RBP6.55□□□□□ -1.36
TRIM4-205ENST00000496896 CR1LQ2VPA4 569 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
TRIM4-205ENST00000496896 CD300LDQ6UXZ3 194 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 OTOP3Q7RTS5 596 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 FRMD5Q7Z6J6 570 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 ZNF526Q8TF50 670 aaPredicted RBP6.55□□□□□ -1.36
TRIM4-205ENST00000496896 PTPRN2Q92932 1015 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 ZBTB8AQ96BR9 441 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 TOE1Q96GM8 510 aaKnown RBP6.55□□□□□ -1.36
TRIM4-205ENST00000496896 NOX5Q96PH1 765 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 SPATA6Q9NWH7 488 aaPredicted RBP6.55□□□□□ -1.36
TRIM4-205ENST00000496896 DTLQ9NZJ0 730 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 MYOTQ9UBF9 498 aa6.55□□□□□ -1.36
TRIM4-205ENST00000496896 TRBV23-1A0A0A0MS06 115 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 OTOL1A6NHN0 477 aaPredicted RBP6.54□□□□□ -1.36
TRIM4-205ENST00000496896 AQP7O14520 342 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 WNT9AO14904 365 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 THBS2P35442 1172 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 ITGA1P56199 1179 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 SPIRE1Q08AE8 756 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 KCNT2Q6UVM3 1135 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 TTLL7Q6ZT98 887 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 CARFQ8N187 725 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 JMYQ8N9B5 988 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms