RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 MMP19Q99542 508 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 ANTXR1Q9H6X2 564 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 VCPKMTQ9H867 229 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 XPNPEP3Q9NQH7 507 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 CNPY2Q9Y2B0 182 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 EXOC6BQ9Y2D4 811 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 DYRK1BQ9Y463 629 aa6.87□□□□□ -1.31
CACNA1C-229ENST00000496818 ZNF532Q9HCE3 1301 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 TRIOBPQ9H2D6 2365 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 GOLIM4O00461 696 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 PDGFAP04085 211 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 CLTBP09497 229 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 GUCY1A2P33402 732 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 LRRC41Q15345 812 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 SLC39A5Q6ZMH5 540 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 Q6ZNB5 142 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 SPICE1Q8N0Z3 855 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 LCORLQ8N3X6 602 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 TRPV1Q8NER1 839 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 BADQ92934 168 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 ATG4CQ96DT6 458 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 KIF1BPQ96EK5 621 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 CCDC17Q96LX7 622 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 CEP63Q96MT8 703 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 BACH2Q9BYV9 841 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 IL1RAPL2Q9NP60 686 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 DCP1AQ9NPI6 582 aaPredicted RBP6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 ARPP21Q9UBL0 812 aaPredicted RBP6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 TACC3Q9Y6A5 838 aa6.86□□□□□ -1.31
CACNA1C-229ENST00000496818 A0A0G2JMZ2 1700 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 MROH7Q68CQ1 1323 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 A0A1W2PQ45 241 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 A0A1W2PQY0 241 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 A0A1W2PRG0 241 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 PQBP1O60828 265 aaKnown RBP6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 MBD4O95243 580 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 RAG1P15918 1043 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 ADCYAP1R1P41586 468 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 FPGSQ05932 587 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 SHHQ15465 462 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 HIF1AQ16665 826 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 C9orf50Q5SZB4 431 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 BTLAQ7Z6A9 289 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 CLEC10AQ8IUN9 316 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 SLC44A5Q8NCS7 719 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 NUP133Q8WUM0 1156 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 CDX2Q99626 313 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 NIF3L1Q9GZT8 377 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 STARD7Q9NQZ5 370 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 ATP8A2Q9NTI2 1148 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 DMGDHQ9UI17 866 aaKnown RBP6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 TMX2Q9Y320 296 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 CTDP1Q9Y5B0 961 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 PLXNB2O15031 1838 aa6.85□□□□□ -1.31
CACNA1C-229ENST00000496818 ALPK3Q96L96 1907 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 NAV1Q8NEY1 1877 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 DCDC2CA8MYV0 355 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 COBLO75128 1261 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 SNRPBP14678 240 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 AKR1B1P15121 316 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 MAPK8P45983 427 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 C20orf194Q5TEA3 1177 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 ZSCAN25Q6NSZ9 544 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 RIOX2Q8IUF8 465 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 MSL3Q8N5Y2 521 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 GIPC2Q8TF65 315 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 MYLIPQ8WY64 445 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 PIK3R5Q8WYR1 880 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 TINF2Q9BSI4 451 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 TEX13BQ9BXU2 312 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 RBCK1Q9BYM8 510 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 ZCCHC2Q9C0B9 1178 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 CHMP4BQ9H444 224 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 ARMT1Q9H993 441 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 KANSL2Q9H9L4 492 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 SPC25Q9HBM1 224 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 TMEM39AQ9NV64 488 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 PAG1Q9NWQ8 432 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 ZHX1Q9UKY1 873 aaPredicted RBP6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 DIS3Q9Y2L1 958 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 FOCADQ5VW36 1801 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 LAMA3Q16787 3333 aa6.84□□□□□ -1.31
CACNA1C-229ENST00000496818 RANBP2P49792 3224 aaKnown RBP6.84□□□□□ -1.32
CACNA1C-229ENST00000496818 SYNGAP1Q96PV0 1343 aa6.83□□□□□ -1.32
CACNA1C-229ENST00000496818 SYNRGQ9UMZ2 1314 aa6.83□□□□□ -1.32
CACNA1C-229ENST00000496818 SZT2Q5T011 3432 aa6.83□□□□□ -1.32
CACNA1C-229ENST00000496818 TCRBV5S4A2TA0A5A2 114 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms