RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 HEATR3Q7Z4Q2 680 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 DHX37Q8IY37 1157 aaKnown RBP22.5■■□□□ 1.19
COL20A1-208ENST00000496810 PPTC7Q8NI37 304 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 SMARCC2Q8TAQ2 1214 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 JAKMIP1Q96N16 626 aaKnown RBP22.5■■□□□ 1.19
COL20A1-208ENST00000496810 FAM217BQ9NTX9 383 aaPredicted RBP22.5■■□□□ 1.19
COL20A1-208ENST00000496810 RTEL1Q9NZ71 1219 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 PTPRSQ13332 1948 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 GRXCR1A8MXD5 290 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 ZBTB43O43298 467 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 F2P00734 622 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 HOXD8P13378 290 aaPredicted RBP22.49■■□□□ 1.19
COL20A1-208ENST00000496810 CDC27P30260 824 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 LAMC2Q13753 1193 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 KRT32Q14532 448 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 DGKDQ16760 1214 aa22.49■■□□□ 1.19
COL20A1-208ENST00000496810 INPP4AQ96PE3 977 aaPredicted RBP22.49■■□□□ 1.19
COL20A1-208ENST00000496810 GOLGA8AA7E2F4 631 aa22.48■■□□□ 1.19
COL20A1-208ENST00000496810 GOLGA8BA8MQT2 603 aa22.48■■□□□ 1.19
COL20A1-208ENST00000496810 ZNF697Q5TEC3 545 aa22.48■■□□□ 1.19
COL20A1-208ENST00000496810 PSRC1Q6PGN9 363 aaPredicted RBP22.48■■□□□ 1.19
COL20A1-208ENST00000496810 SPATA33Q96N06 139 aa22.48■■□□□ 1.19
COL20A1-208ENST00000496810 CASTP20810 708 aaKnown RBP22.47■■□□□ 1.19
COL20A1-208ENST00000496810 PBX2P40425 430 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 PSEN2P49810 448 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 APOBRQ0VD83 1088 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 HIC1Q14526 733 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 SYNE3Q6ZMZ3 975 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 DHX38Q92620 1227 aaKnown RBP22.47■■□□□ 1.19
COL20A1-208ENST00000496810 CUL5Q93034 780 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 ALG1Q9BT22 464 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 PSTPIP2Q9H939 334 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 MYO9BQ13459 2157 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 VCANP13611 3396 aa22.47■■□□□ 1.19
COL20A1-208ENST00000496810 HAS3O00219 553 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 SUPT20HL2P0C7V6 817 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 MFSD10Q14728 455 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 PTGISQ16647 500 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 PCNX4Q63HM2 1172 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 Q6ZUG5 572 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 OTOP2Q7RTS6 562 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 SESTD1Q86VW0 696 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 RBM28Q9NW13 759 aaKnown RBP22.46■■□□□ 1.19
COL20A1-208ENST00000496810 HDAC6Q9UBN7 1215 aa22.46■■□□□ 1.19
COL20A1-208ENST00000496810 NAP1L2Q9ULW6 460 aaPredicted RBP22.46■■□□□ 1.19
COL20A1-208ENST00000496810 SPATA31C2B4DYI2 1134 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 DNAJB2P25686 324 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 ICAM3P32942 547 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 PTPN11Q06124 597 aaPredicted RBP22.45■■□□□ 1.18
COL20A1-208ENST00000496810 KIAA0753Q2KHM9 967 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 KCNV1Q6PIU1 500 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 HERVK_113Q902F9 699 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 BRF1Q92994 677 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 WNT8BQ93098 351 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 PGBD1Q96JS3 809 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 C16orf70Q9BSU1 422 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 GTF2IRD1Q9UHL9 959 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 STXBP5LQ9Y2K9 1186 aa22.45■■□□□ 1.18
COL20A1-208ENST00000496810 REV3LO60673 3130 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 HMGB1P09429 215 aaKnown RBP22.44■■□□□ 1.18
COL20A1-208ENST00000496810 TGFB3P10600 412 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 ZNF200P98182 395 aaPredicted RBP22.44■■□□□ 1.18
COL20A1-208ENST00000496810 GNPTABQ3T906 1256 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 BLOC1S2Q6QNY1 142 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 DEFB128Q7Z7B8 93 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 TRIM50Q86XT4 487 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 SEMA6BQ9H3T3 888 aa22.44■■□□□ 1.18
COL20A1-208ENST00000496810 V9GY48 417 aaPredicted RBP22.44■■□□□ 1.18
COL20A1-208ENST00000496810 NID2Q14112 1375 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 STXBP3O00186 592 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 ADAMTS3O15072 1205 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 FIBPO43427 364 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 REC8O95072 547 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 ITGB5P18084 799 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 RPS6KB1P23443 525 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 ADD1P35611 737 aaKnown RBP22.43■■□□□ 1.18
COL20A1-208ENST00000496810 SP4Q02446 784 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 CYFIP1Q7L576 1253 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 PBX4Q9BYU1 374 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 MLXIPQ9HAP2 919 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 NOD1Q9Y239 953 aa22.43■■□□□ 1.18
COL20A1-208ENST00000496810 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.42■■□□□ 1.18
COL20A1-208ENST00000496810 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.42■■□□□ 1.18
COL20A1-208ENST00000496810 PITPNM1O00562 1244 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 PPFIA3O75145 1194 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 STAM2O75886 525 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 FGBP02675 491 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 LGALS2P05162 132 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 IQCF3P0C7M6 154 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 METAP2P50579 478 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL20A1-208ENST00000496810 NAPAP54920 295 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 FGD1P98174 961 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 METTL7BQ6UX53 244 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 C7orf31Q8N865 590 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 CDX2Q99626 313 aaPredicted RBP22.42■■□□□ 1.18
COL20A1-208ENST00000496810 PCDHA6Q9UN73 950 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 PCDHA8Q9Y5H6 950 aa22.42■■□□□ 1.18
COL20A1-208ENST00000496810 ATP9AO75110 1047 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 PPFIA4O75335 1185 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 GPNMBQ14956 572 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms