RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SIRPGQ9P1W8 387 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 MSRB2Q9Y3D2 182 aa5.87□□□□□ -1.47
CD46-218ENST00000496723 IQCA1LA6NCM1 817 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 MROH6A6NGR9 719 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 PDPK1O15530 556 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 FUCA1P04066 466 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 GRIA2P42262 883 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 PRSS53Q2L4Q9 553 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 ZC3H18Q86VM9 953 aaKnown RBP5.86□□□□□ -1.47
CD46-218ENST00000496723 MIB1Q86YT6 1006 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 NPLOC4Q8TAT6 608 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 PMFBP1Q8TBY8 1022 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 FRS2Q8WU20 508 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 SGSM3Q96HU1 749 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 CCDC140Q96MF4 163 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 C8orf49Q96NF6 230 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 MMP19Q99542 508 aa5.86□□□□□ -1.47
CD46-218ENST00000496723 NGRNQ9NPE2 291 aaKnown RBP5.86□□□□□ -1.47
CD46-218ENST00000496723 CPP00450 1065 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 SCG5P05408 212 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 GFRA1P56159 465 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 SERINC3Q13530 473 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 HSP90AA2PQ14568 343 aaPredicted RBP5.85□□□□□ -1.47
CD46-218ENST00000496723 SOGA3Q5TF21 947 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 MBLAC2Q68D91 279 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 TMEM145Q8NBT3 493 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 SEC14L1Q92503 715 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 DVL3Q92997 716 aaPredicted RBP5.85□□□□□ -1.47
CD46-218ENST00000496723 DNAJC2Q99543 621 aaKnown RBP5.85□□□□□ -1.47
CD46-218ENST00000496723 CCDC113Q9H0I3 377 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 SRRDQ9UH36 339 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 INVSQ9Y283 1065 aa5.85□□□□□ -1.47
CD46-218ENST00000496723 C9orf118A6NHY6 69 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 MEFVO15553 781 aaPredicted RBP5.84□□□□□ -1.47
CD46-218ENST00000496723 CAPNS1P04632 268 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 SLC6A11P48066 632 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 RASGRF1Q13972 1273 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 SURF1Q15526 300 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 INF2Q27J81 1249 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 MTERF2Q49AM1 385 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 KRTAP5-3Q6L8H2 238 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 GLB1LQ6UWU2 654 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 CD300LDQ6UXZ3 194 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 SPATC1Q76KD6 591 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 KREMEN2Q8NCW0 462 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 CHST13Q8NET6 341 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 IER2Q9BTL4 223 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 TMEFF2Q9UIK5 374 aaPredicted RBP5.84□□□□□ -1.47
CD46-218ENST00000496723 SIT1Q9Y3P8 196 aa5.84□□□□□ -1.47
CD46-218ENST00000496723 PRR31Q5SQ13 230 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 E4F1Q66K89 784 aaPredicted RBP5.83□□□□□ -1.48
CD46-218ENST00000496723 IQCEQ6IPM2 695 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 CCDC103Q8IW40 242 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 PPIL6Q8IXY8 311 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 LRRC47Q8N1G4 583 aaKnown RBP5.83□□□□□ -1.48
CD46-218ENST00000496723 KCTD13Q8WZ19 329 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 DPF3Q92784 378 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 DIO2Q92813 273 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
CD46-218ENST00000496723 LCORQ96JN0 433 aaPredicted RBP5.83□□□□□ -1.48
CD46-218ENST00000496723 DRC1Q96MC2 740 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 AARSD1Q9BTE6 412 aaKnown RBP5.83□□□□□ -1.48
CD46-218ENST00000496723 SSBP3Q9BWW4 388 aaPredicted RBP5.83□□□□□ -1.48
CD46-218ENST00000496723 ARHGEF4Q9NR80 690 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 BTG4Q9NY30 223 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 PFDN2Q9UHV9 154 aa5.83□□□□□ -1.48
CD46-218ENST00000496723 ZNF536O15090 1300 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 C22orf46C9J442 243 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 ARNTLO00327 626 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 SGSM2O43147 1006 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 ITGA1P56199 1179 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 SSRP1Q08945 709 aaKnown RBP5.82□□□□□ -1.48
CD46-218ENST00000496723 MAP4K2Q12851 820 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 RASA3Q14644 834 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 SLC35F1Q5T1Q4 408 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 MROH9Q5TGP6 573 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 MCTP2Q6DN12 878 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 DENND5AQ6IQ26 1287 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 RIOX2Q8IUF8 465 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 TXNDC5Q8NBS9 432 aaKnown RBP5.82□□□□□ -1.48
CD46-218ENST00000496723 C1orf159Q96HA4 380 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 DEPDC7Q96QD5 511 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 SRPK1Q96SB4 655 aaKnown RBP5.82□□□□□ -1.48
CD46-218ENST00000496723 SPATA9Q9BWV2 254 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 SNTG2Q9NY99 539 aa5.82□□□□□ -1.48
CD46-218ENST00000496723 TRAV20A0A0B4J274 112 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 FAM221BA6H8Z2 402 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 PRODHO43272 600 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 DLX3O60479 287 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 LTBRP36941 435 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 IFRD2Q12894 506 aaPredicted RBP5.81□□□□□ -1.48
CD46-218ENST00000496723 KCNAB2Q13303 367 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 ACBD5Q5T8D3 534 aaPredicted RBP5.81□□□□□ -1.48
CD46-218ENST00000496723 NSMFQ6X4W1 530 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 PLEKHH3Q7Z736 793 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 FAM126BQ8IXS8 530 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 FAM26EQ8N5C1 309 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 SLC16A11Q8NCK7 471 aa5.81□□□□□ -1.48
CD46-218ENST00000496723 KISS1RQ969F8 398 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms