RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 RIC8AQ9NPQ8 531 aa23.68■■□□□ 1.38
COL9A2-211ENST00000496215 UMODL1Q5DID0 1318 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 FIBPO43427 364 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 SCG2P13521 617 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 PDIA3P30101 505 aaKnown RBP23.67■■□□□ 1.38
COL9A2-211ENST00000496215 ANAPC15P60006 121 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 FPGSQ05932 587 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 DGKDQ16760 1214 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 FAM47CQ5HY64 1035 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
COL9A2-211ENST00000496215 ALDH8A1Q9H2A2 487 aaPredicted RBP23.67■■□□□ 1.38
COL9A2-211ENST00000496215 PDRG1Q9NUG6 133 aa23.67■■□□□ 1.38
COL9A2-211ENST00000496215 DOCK5Q9H7D0 1870 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 SORBS3O60504 671 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 ICAM3P32942 547 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 SP2Q02086 613 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 NBPF20Q3BBV1 942 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 SPATA33Q96N06 139 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 PPP1R12CQ9BZL4 782 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 GLT8D2Q9H1C3 349 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 RTEL1Q9NZ71 1219 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 PCDHA6Q9UN73 950 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 PCDHA8Q9Y5H6 950 aa23.66■■□□□ 1.38
COL9A2-211ENST00000496215 TANC1Q9C0D5 1861 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 CHMP4BP1P59074 171 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 CCT2P78371 535 aaKnown RBP23.65■■□□□ 1.38
COL9A2-211ENST00000496215 AKAP17AQ02040 695 aaKnown RBP23.65■■□□□ 1.38
COL9A2-211ENST00000496215 MYSM1Q5VVJ2 828 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 NFRKBQ6P4R8 1299 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 C16orf59Q7L2K0 433 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 NLRX1Q86UT6 975 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 PHKBQ93100 1093 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 RNF26Q9BY78 433 aaPredicted RBP23.65■■□□□ 1.38
COL9A2-211ENST00000496215 BCAS3Q9H6U6 928 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 MLXIPQ9HAP2 919 aa23.65■■□□□ 1.38
COL9A2-211ENST00000496215 NCOA5Q9HCD5 579 aaKnown RBP23.65■■□□□ 1.38
COL9A2-211ENST00000496215 TRMT13Q9NUP7 481 aaKnown RBP23.65■■□□□ 1.38
COL9A2-211ENST00000496215 COL6A3P12111 3177 aa23.64■■□□□ 1.38
COL9A2-211ENST00000496215 SMCO2A6NFE2 343 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 SPATA31C2B4DYI2 1134 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 PRPF3O43395 683 aaKnown RBP23.64■■□□□ 1.37
COL9A2-211ENST00000496215 ZNF286BP0CG31 522 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 CYP2C18P33260 490 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 PTPN11Q06124 597 aaPredicted RBP23.64■■□□□ 1.37
COL9A2-211ENST00000496215 MFSD5Q6N075 450 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 CCDC12Q8WUD4 166 aaPredicted RBP23.64■■□□□ 1.37
COL9A2-211ENST00000496215 KAT2BQ92831 832 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 KATNAL1Q9BW62 490 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 HIPK3Q9H422 1215 aa23.64■■□□□ 1.37
COL9A2-211ENST00000496215 SUPT20HL2P0C7V6 817 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 IFNAR1P17181 557 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 SEMA3FQ13275 785 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 AP3B2Q13367 1082 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 NEDD9Q14511 834 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 NTRK3Q16288 839 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 HSDL1Q3SXM5 330 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 Q7L0L9 218 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 GPRASP2Q96D09 838 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 ZNF274Q96GC6 653 aaPredicted RBP23.63■■□□□ 1.37
COL9A2-211ENST00000496215 NOC4LQ9BVI4 516 aaKnown RBP23.63■■□□□ 1.37
COL9A2-211ENST00000496215 SLC26A6Q9BXS9 759 aa23.63■■□□□ 1.37
COL9A2-211ENST00000496215 NOP56O00567 594 aaKnown RBP23.62■■□□□ 1.37
COL9A2-211ENST00000496215 F2P00734 622 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 FOSP01100 380 aaPredicted RBP23.62■■□□□ 1.37
COL9A2-211ENST00000496215 HOXD8P13378 290 aaPredicted RBP23.62■■□□□ 1.37
COL9A2-211ENST00000496215 CSF2RAP15509 400 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 METTL7BQ6UX53 244 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 TMEM199Q8N511 208 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 CDHR1Q96JP9 859 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 ANO3Q9BYT9 981 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 WNT8AQ9H1J5 351 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 CDH23Q9H251 3354 aa23.62■■□□□ 1.37
COL9A2-211ENST00000496215 ESYT2A0FGR8 921 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 CPLX1O14810 134 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 PPIGQ13427 754 aaKnown RBP eCLIP23.61■■□□□ 1.372e-11■■■□□ 15.4
COL9A2-211ENST00000496215 PKN1Q16512 942 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 TRIM22Q8IYM9 498 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 CCDC148Q8NFR7 591 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 VWCEQ96DN2 955 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 PGBD1Q96JS3 809 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 CTAGE1Q96RT6 745 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.61■■□□□ 1.377e-7■□□□□ 9.4
COL9A2-211ENST00000496215 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
COL9A2-211ENST00000496215 NOD1Q9Y239 953 aa23.61■■□□□ 1.37
COL9A2-211ENST00000496215 PPFIA3O75145 1194 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 PPFIA4O75335 1185 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 CYP2C9P11712 490 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 ITGB5P18084 799 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 CLK2P49760 499 aaKnown RBP23.6■■□□□ 1.37
COL9A2-211ENST00000496215 PSEN2P49810 448 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 STK3Q13188 491 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 MTMR1Q13613 665 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 MFSD10Q14728 455 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 GPR153Q6NV75 609 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 CYFIP1Q7L576 1253 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 GIMAP8Q8ND71 665 aaPredicted RBP23.6■■□□□ 1.37
COL9A2-211ENST00000496215 SENP7Q9BQF6 1050 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 C6orf50Q9HD87 102 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 TMEM260Q9NX78 707 aa23.6■■□□□ 1.37
COL9A2-211ENST00000496215 TELO2Q9Y4R8 837 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms