RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 DNAJC5GQ8N7S2 189 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 DCAF4Q8WV16 495 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 PTPN18Q99952 460 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SLC45A1Q9Y2W3 748 aa11.79□□□□□ -0.52
RAB11FIP3-211ENST00000495663 RLFQ13129 1914 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 PDHXO00330 501 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 IGF2BP3O00425 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 PDHBP11177 359 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 BMP3P12645 472 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 COL8A1P27658 744 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TXLNAP40222 546 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 NEK4P51957 841 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TNP2Q05952 138 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 FAM83BQ5T0W9 1011 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ZNF654Q8IZM8 581 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 FAM43AQ8N2R8 423 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 BRF1Q92994 677 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KIF2CQ99661 725 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 TANGO6Q9C0B7 1094 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ZDHHC3Q9NYG2 299 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 ISY1Q9ULR0 285 aaKnown RBP11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 SLC12A7Q9Y666 1083 aa11.78□□□□□ -0.52
RAB11FIP3-211ENST00000495663 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.52
RAB11FIP3-211ENST00000495663 KRBA1A5PL33 1030 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 BACH1O14867 736 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 DDAH1O94760 285 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CALM1P0DP23 149 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CALM2P0DP24 149 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CALM3P0DP25 149 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 SNHG28P0DPA3 235 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ARAFP10398 606 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 EPXP11678 715 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 RABEP1Q15276 862 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ANKRD1Q15327 319 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 GPATCH4Q5T3I0 446 aaKnown RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CATSPERGQ6ZRH7 1159 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ZDHHC1Q8WTX9 485 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 PARK7Q99497 189 aaKnown RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 NUP88Q99567 741 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 SUV39H2Q9H5I1 410 aa11.77□□□□□ -0.53
RAB11FIP3-211ENST00000495663 MYH6P13533 1939 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 KLF18A0A0U1RQI7 1052 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 FLOT1O75955 427 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 PROCP04070 461 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 PARP1P09874 1014 aaKnown RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 STAT2P52630 851 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 AK2P54819 239 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 TROAPQ12815 778 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 IKQ13123 557 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 TOB2Q14106 344 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 TAF1CQ15572 869 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ASPRV1Q53RT3 343 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 KCTD1Q719H9 257 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 RASGRP2Q7LDG7 609 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ADAMTS19Q8TE59 1207 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 CHURC1Q8WUH1 139 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 MAP3K14Q99558 947 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 SCHIP1Q9P0W5 487 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 FEM1BQ9UK73 627 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 MYPNQ86TC9 1320 aa11.76□□□□□ -0.53
RAB11FIP3-211ENST00000495663 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ZBTB43O43298 467 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 PLA2G6O60733 806 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 KIF5BP33176 963 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 RCAN1P53805 252 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 EVCP57679 992 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 COG2Q14746 738 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 GRM4Q14833 912 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 FAM160B2Q86V87 743 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 MICU3Q86XE3 530 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 PRPF38AQ8NAV1 312 aaKnown RBP11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 SLF1Q9BQI6 1058 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 ZFYVE28Q9HCC9 887 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 HOXC10Q9NYD6 342 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
RAB11FIP3-211ENST00000495663 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms