RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.32■□□□□ 0.528e-11■■■□□ 14.7
CBX4-204ENST00000495122 PORCNQ9H237 461 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 CPVLQ9H3G5 476 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 IMPACTQ9P2X3 320 aa18.32■□□□□ 0.52
CBX4-204ENST00000495122 BIN1O00499 593 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 CNMDO75829 334 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 FARP2O94887 1054 aaPredicted RBP18.31■□□□□ 0.52
CBX4-204ENST00000495122 BMP3P12645 472 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 CAPN2P17655 700 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 MAPK4P31152 587 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 DPYDQ12882 1025 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 NCAPHQ15003 741 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 Q3C1V9 767 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 USP49Q70CQ1 688 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 CLEC10AQ8IUN9 316 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 SIAH1Q8IUQ4 282 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 PDILTQ8N807 584 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 ENOX1Q8TC92 643 aaKnown RBP18.31■□□□□ 0.52
CBX4-204ENST00000495122 TBCKQ8TEA7 893 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 TRIB2Q92519 343 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 ERCC4Q92889 916 aaPredicted RBP18.31■□□□□ 0.52
CBX4-204ENST00000495122 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 CRISPLD2Q9H0B8 497 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 DISC1Q9NRI5 854 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 TMX2Q9Y320 296 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
CBX4-204ENST00000495122 TRIOBPQ9H2D6 2365 aa18.31■□□□□ 0.52
CBX4-204ENST00000495122 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 NDUFB10O96000 172 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 FOSP01100 380 aaPredicted RBP18.3■□□□□ 0.52
CBX4-204ENST00000495122 UBA7P41226 1012 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
CBX4-204ENST00000495122 GSDMDP57764 484 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 TRIM32Q13049 653 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 IL17AQ16552 155 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 SYDE2Q5VT97 1194 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 PDXDC2PQ6P474 469 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 LBX2Q6XYB7 198 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 KCTD1Q719H9 257 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 AMNQ9BXJ7 453 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.3■□□□□ 0.52
CBX4-204ENST00000495122 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
CBX4-204ENST00000495122 A0A087X0B3 334 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 A0A1W2PRG0 241 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 CCNT1O60563 726 aaKnown RBP18.29■□□□□ 0.52
CBX4-204ENST00000495122 CYP2B6P20813 491 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 STAT6P42226 847 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 PDIA5Q14554 519 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 CDC37Q16543 378 aaPredicted RBP18.29■□□□□ 0.52
CBX4-204ENST00000495122 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 LETM2Q2VYF4 491 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 HABP4Q5JVS0 413 aaKnown RBP18.29■□□□□ 0.52
CBX4-204ENST00000495122 TTBK2Q6IQ55 1244 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 GPR142Q7Z601 462 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 USP6NLQ92738 828 aa18.29■□□□□ 0.52
CBX4-204ENST00000495122 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
CBX4-204ENST00000495122 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 RPTORQ8N122 1335 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 MCM3APO60318 1980 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 SPDYE16A6NNV3 312 aaPredicted RBP18.28■□□□□ 0.52
CBX4-204ENST00000495122 H0YGN5 161 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 PPP1R11O60927 126 aaPredicted RBP18.28■□□□□ 0.52
CBX4-204ENST00000495122 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 XRCC5P13010 732 aaKnown RBP18.28■□□□□ 0.52
CBX4-204ENST00000495122 USP11P51784 963 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 MORN1Q5T089 497 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 MAP3K21Q5TCX8 1036 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 JAKMIP3Q5VZ66 844 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 RRAGBQ5VZM2 374 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 IGSF22Q8N9C0 903 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 MTMR9Q96QG7 549 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 HTATIP2Q9BUP3 242 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 TMEM60Q9H2L4 133 aa18.28■□□□□ 0.52
CBX4-204ENST00000495122 TFRCP02786 760 aaKnown RBP18.27■□□□□ 0.52
CBX4-204ENST00000495122 PPP1R2P41236 205 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 KCNB1Q14721 858 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 FAM160B2Q86V87 743 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 FBXO11Q86XK2 927 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 CHURC1Q8WUH1 139 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 HMX1Q9NP08 348 aaPredicted RBP18.27■□□□□ 0.52
CBX4-204ENST00000495122 BTBD7Q9P203 1132 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 STK24Q9Y6E0 443 aa18.27■□□□□ 0.52
CBX4-204ENST00000495122 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 CYP3A7P24462 503 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 SLC16A2P36021 539 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 AMPD3Q01432 767 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 CALCRLQ16602 461 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
CBX4-204ENST00000495122 CABP7Q86V35 215 aa18.26■□□□□ 0.51
CBX4-204ENST00000495122 TRMT44Q8IYL2 757 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms