RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 GDF6Q6KF10 455 aaPredicted RBP12.24□□□□□ -0.45
NELFE-213ENST00000494956 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 Q6ZUG5 572 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 OTOP2Q7RTS6 562 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 DEFB128Q7Z7B8 93 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 SAMD3Q8N6K7 520 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 TET1Q8NFU7 2136 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 SPATA33Q96N06 139 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
NELFE-213ENST00000494956 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 LZTS2Q9BRK4 669 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 IL23AQ9NPF7 189 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
NELFE-213ENST00000494956 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 GOLGA8BA8MQT2 603 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
NELFE-213ENST00000494956 PSEN2P49810 448 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 TRAF1Q13077 416 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 HIC1Q14526 733 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 DGKDQ16760 1214 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 RTN1Q16799 776 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 CELF3Q5SZQ8 465 aaKnown RBP12.23□□□□□ -0.45
NELFE-213ENST00000494956 WWC2Q6AWC2 1192 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 NFRKBQ6P4R8 1299 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 KCNB2Q92953 911 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 CUL5Q93034 780 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 PGBD1Q96JS3 809 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
NELFE-213ENST00000494956 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 ADAMTS3O15072 1205 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 ZBTB43O43298 467 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 KPNA6O60684 536 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 FGBP02675 491 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 SMAD3P84022 425 aaKnown RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 SP4Q02446 784 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 MFSD10Q14728 455 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 PTGISQ16647 500 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 KIAA0753Q2KHM9 967 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 RASIP1Q5U651 963 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 CYFIP1Q7L576 1253 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 PPTC7Q8NI37 304 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 DHX38Q92620 1227 aaKnown RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 BRF1Q92994 677 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 WNT8BQ93098 351 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 EMID1Q96A84 441 aaPredicted RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 INPP4AQ96PE3 977 aaPredicted RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 MLXIPQ9HAP2 919 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
NELFE-213ENST00000494956 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
NELFE-213ENST00000494956 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 HAS3O00219 553 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 ATP9AO75110 1047 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 F2P00734 622 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 DNAJB2P25686 324 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 FGD1P98174 961 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 KRT32Q14532 448 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 TRIM50Q86XT4 487 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 MYLIPQ8WY64 445 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 HERVK_113Q902F9 699 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 CDX2Q99626 313 aaPredicted RBP12.21□□□□□ -0.45
NELFE-213ENST00000494956 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
NELFE-213ENST00000494956 C16orf70Q9BSU1 422 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 SEZ6LQ9BYH1 1024 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 PBX4Q9BYU1 374 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 TMEM260Q9NX78 707 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 NOD1Q9Y239 953 aa12.21□□□□□ -0.45
NELFE-213ENST00000494956 PTPRSQ13332 1948 aa12.21□□□□□ -0.46
NELFE-213ENST00000494956 IQCF3P0C7M6 154 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 HOXD8P13378 290 aaPredicted RBP12.2□□□□□ -0.46
NELFE-213ENST00000494956 MYOGP15173 224 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 ITGB5P18084 799 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 ICAM3P32942 547 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 RABGGTBP53611 331 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 NAPAP54920 295 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
NELFE-213ENST00000494956 GPNMBQ14956 572 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 PSRC1Q6PGN9 363 aaPredicted RBP12.2□□□□□ -0.46
NELFE-213ENST00000494956 KCNV1Q6PIU1 500 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 RBM28Q9NW13 759 aaKnown RBP12.2□□□□□ -0.46
NELFE-213ENST00000494956 GTF2IRD1Q9UHL9 959 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 PCDHA6Q9UN73 950 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 STXBP5LQ9Y2K9 1186 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 PCDHA8Q9Y5H6 950 aa12.2□□□□□ -0.46
NELFE-213ENST00000494956 ZBBXA8MT70 800 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 STXBP3O00186 592 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 FIBPO43427 364 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 LGALS2P05162 132 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 TGFB3P10600 412 aa12.19□□□□□ -0.46
NELFE-213ENST00000494956 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms