RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 IL13P35225 146 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 PLCD1P51178 756 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 VAV2P52735 878 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ZNF131P52739 623 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ERVK-24P63145 666 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RELBQ01201 579 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 KIF5AQ12840 1032 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 FLIIQ13045 1269 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 IFT88Q13099 833 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 PAK2Q13177 524 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 NR5A1Q13285 461 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 PABPC4Q13310 644 aaKnown RBP eCLIP3.01□□□□□ -1.93
MDC1-208ENST00000494654 ITGB3BPQ13352 177 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 SNX1Q13596 522 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ZNF268Q14587 947 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 R3HDM1Q15032 1099 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 SPRED3Q2MJR0 410 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCDC178Q5BJE1 867 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 NT5DC1Q5TFE4 455 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 HDGFL1Q5TGJ6 251 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 AGBL2Q5U5Z8 902 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 USPL1Q5W0Q7 1092 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 HAUS3Q68CZ6 603 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CYP26C1Q6V0L0 522 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCNI2Q6ZMN8 369 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCDC129Q6ZRS4 1044 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 SND1Q7KZF4 910 aaKnown RBP eCLIP3.01□□□□□ -1.93
MDC1-208ENST00000494654 HDGFL2Q7Z4V5 671 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 APBB1IPQ7Z5R6 666 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 RNF168Q8IYW5 571 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 PDILTQ8N807 584 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 MLKLQ8NB16 471 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TSEN2Q8NCE0 465 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 ACRBPQ8NEB7 543 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ENOX1Q8TC92 643 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 SMCR8Q8TEV9 937 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 ANKRD24Q8TF21 1146 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TEKT4Q8WW24 435 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 MAIP1Q8WWC4 291 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.01□□□□□ -1.93
MDC1-208ENST00000494654 PIK3R5Q8WYR1 880 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCT6BQ92526 530 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 AZIN2Q96A70 460 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ARL8AQ96BM9 186 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TBC1D31Q96DN5 1066 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RRP36Q96EU6 259 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 ATP6V1G3Q96LB4 118 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RNPC3Q96LT9 517 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 CTAGE1Q96RT6 745 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCT8L2Q96SF2 557 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 MMS19Q96T76 1030 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 SDF4Q9BRK5 362 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CCDC28BQ9BUN5 200 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TIPINQ9BVW5 301 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 FTOQ9C0B1 505 aaKnown RBP eCLIP3.01□□□□□ -1.93
MDC1-208ENST00000494654 MAF1Q9H063 256 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 GGNBP2Q9H3C7 697 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ALG2Q9H553 416 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RMI1Q9H9A7 625 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 KCNMB3Q9NPA1 279 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TRPV5Q9NQA5 729 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 RAB6BQ9NRW1 208 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ABHD10Q9NUJ1 306 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 DNAAF2Q9NVR5 837 aaKnown RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 FANCLQ9NW38 375 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 STIM2Q9P246 746 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ATXN10Q9UBB4 475 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 SUN2Q9UH99 717 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 USP21Q9UK80 565 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 WWC3Q9ULE0 1092 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CEP131Q9UPN4 1083 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 SPG7Q9UQ90 795 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 WDR37Q9Y2I8 494 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 ZNF330Q9Y3S2 320 aaPredicted RBP3.01□□□□□ -1.93
MDC1-208ENST00000494654 PCDHB11Q9Y5F2 797 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.01□□□□□ -1.93
MDC1-208ENST00000494654 SAR1BQ9Y6B6 198 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 PXDNQ92626 1479 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 NHSQ6T4R5 1651 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 TECPR2O15040 1411 aa3.01□□□□□ -1.93
MDC1-208ENST00000494654 CPDO75976 1380 aa3□□□□□ -1.93
MDC1-208ENST00000494654 NID2Q14112 1375 aa3□□□□□ -1.93
MDC1-208ENST00000494654 PLEKHG1Q9ULL1 1385 aa3□□□□□ -1.93
MDC1-208ENST00000494654 DUOX1Q9NRD9 1551 aa3□□□□□ -1.93
MDC1-208ENST00000494654 SPATA31A6Q5VVP1 1343 aa3□□□□□ -1.93
MDC1-208ENST00000494654 DDX60LQ5H9U9 1706 aaKnown RBP3□□□□□ -1.93
MDC1-208ENST00000494654 NRAPQ86VF7 1730 aa3□□□□□ -1.93
MDC1-208ENST00000494654 SHANK3Q9BYB0 1731 aa3□□□□□ -1.93
MDC1-208ENST00000494654 WDR81Q562E7 1941 aa3□□□□□ -1.93
MDC1-208ENST00000494654 FIGNL2A6NMB9 653 aa3□□□□□ -1.93
MDC1-208ENST00000494654 DNM1LO00429 736 aa3□□□□□ -1.93
MDC1-208ENST00000494654 CHL1O00533 1208 aa3□□□□□ -1.93
MDC1-208ENST00000494654 CYP27B1O15528 508 aa3□□□□□ -1.93
MDC1-208ENST00000494654 PRPF3O43395 683 aaKnown RBP3□□□□□ -1.93
MDC1-208ENST00000494654 KRT86O43790 486 aa3□□□□□ -1.93
MDC1-208ENST00000494654 SMIM24O75264 130 aa3□□□□□ -1.93
MDC1-208ENST00000494654 LGR5O75473 907 aa3□□□□□ -1.93
MDC1-208ENST00000494654 TMCC1O94876 653 aa3□□□□□ -1.93
MDC1-208ENST00000494654 ANP32DO95626 131 aa3□□□□□ -1.93
MDC1-208ENST00000494654 GYPCP04921 128 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms