RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ITGAVP06756 1048 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 TACR2P21452 398 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 LRP10Q7Z4F1 713 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 SH3TC2Q8TF17 1288 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 DPF3Q92784 378 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 COPS5Q92905 334 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 ZBTB8AQ96BR9 441 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 DDX11Q96FC9 970 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 AKT3Q9Y243 479 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 SIT1Q9Y3P8 196 aa6.56□□□□□ -1.36
SMC4-224ENST00000494612 CYR61O00622 381 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 TBX1O43435 398 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 KCNH1O95259 989 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 C8BP07358 591 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 MBLAC2Q68D91 279 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 TTLL7Q6ZT98 887 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 ST13P5Q8NFI4 369 aaPredicted RBP6.55□□□□□ -1.36
SMC4-224ENST00000494612 ADAMTS17Q8TE56 1095 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 USP33Q8TEY7 942 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 SPATA9Q9BWV2 254 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 TBX22Q9Y458 520 aa6.55□□□□□ -1.36
SMC4-224ENST00000494612 A0A1W2PQU0 124 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 AGRPO00253 132 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
SMC4-224ENST00000494612 NPHS1O60500 1241 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 FUCA1P04066 466 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 NAT2P11245 290 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 GRIA2P42262 883 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 SMAD4Q13485 552 aaKnown RBP6.54□□□□□ -1.36
SMC4-224ENST00000494612 BVESQ8NE79 360 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 MMP19Q99542 508 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 SYT3Q9BQG1 590 aa6.54□□□□□ -1.36
SMC4-224ENST00000494612 C11orf84Q9BUA3 381 aaPredicted RBP6.54□□□□□ -1.36
SMC4-224ENST00000494612 ESYT3A0FGR9 886 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 CYP2C8P10632 490 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
SMC4-224ENST00000494612 THBS2P35442 1172 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 PPP2R2AP63151 447 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 YOD1Q5VVQ6 348 aaPredicted RBP6.53□□□□□ -1.36
SMC4-224ENST00000494612 SDE2Q6IQ49 451 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 USP51Q70EK9 711 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 ZNF227Q86WZ6 799 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 ZFPM1Q8IX07 1006 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
SMC4-224ENST00000494612 PCDH18Q9HCL0 1135 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 EMC9Q9Y3B6 208 aa6.53□□□□□ -1.36
SMC4-224ENST00000494612 IQCA1LA6NCM1 817 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 SGSM2O43147 1006 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 SLPIP03973 132 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 PLS3P13797 630 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 ZNF143P52747 638 aaPredicted RBP6.52□□□□□ -1.37
SMC4-224ENST00000494612 RBM10P98175 930 aaKnown RBP6.52□□□□□ -1.37
SMC4-224ENST00000494612 SQSTM1Q13501 440 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 SF1Q15637 639 aaKnown RBP6.52□□□□□ -1.37
SMC4-224ENST00000494612 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 TBC1D10BQ4KMP7 808 aaPredicted RBP6.52□□□□□ -1.37
SMC4-224ENST00000494612 FOXB2Q5VYV0 432 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 MIB1Q86YT6 1006 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 BTN2A2Q8WVV5 523 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 DVL3Q92997 716 aaPredicted RBP6.52□□□□□ -1.37
SMC4-224ENST00000494612 SSBP3Q9BWW4 388 aaPredicted RBP6.52□□□□□ -1.37
SMC4-224ENST00000494612 EPN3Q9H201 632 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 GPRC5CQ9NQ84 441 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 FANCLQ9NW38 375 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 CLEC1BQ9P126 229 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 PTCH2Q9Y6C5 1203 aa6.52□□□□□ -1.37
SMC4-224ENST00000494612 PLATP00750 562 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 CYP4F3Q08477 520 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 RGL3Q3MIN7 710 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 FAM209AQ5JX71 171 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 ETV3LQ6ZN32 361 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 LRRC47Q8N1G4 583 aaKnown RBP6.51□□□□□ -1.37
SMC4-224ENST00000494612 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 KYQ8NBH2 561 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 CDC6Q99741 560 aa6.51□□□□□ -1.37
SMC4-224ENST00000494612 PRODHO43272 600 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 ADCY3O60266 1144 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 ECI1P42126 302 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 KCNJ6P48051 423 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 SCRN1Q12765 414 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 HSP90AA2PQ14568 343 aaPredicted RBP6.5□□□□□ -1.37
SMC4-224ENST00000494612 INF2Q27J81 1249 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 CRB2Q5IJ48 1285 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 FAM26FQ5R3K3 315 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 GTF2IRD2BQ6EKJ0 949 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 GTF2IRD2Q86UP8 949 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 DCP2Q8IU60 420 aaKnown RBP6.5□□□□□ -1.37
SMC4-224ENST00000494612 SH3RF3Q8TEJ3 882 aaPredicted RBP6.5□□□□□ -1.37
SMC4-224ENST00000494612 THAP3Q8WTV1 239 aaPredicted RBP6.5□□□□□ -1.37
SMC4-224ENST00000494612 MRGPRX3Q96LB0 322 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 ARHGEF4Q9NR80 690 aa6.5□□□□□ -1.37
SMC4-224ENST00000494612 CADPSQ9ULU8 1353 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 TRAV20A0A0B4J274 112 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 FZD7O75084 574 aa6.49□□□□□ -1.37
SMC4-224ENST00000494612 ACVRL1P37023 503 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms