RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GTPBP4Q9BZE4 634 aaKnown RBP18.48■□□□□ 0.55
ATG4B-225ENST00000494465 AS3MTQ9HBK9 375 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 PAPPA2Q9BXP8 1791 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 SFPQP23246 707 aaKnown RBP eCLIP18.48■□□□□ 0.55
ATG4B-225ENST00000494465 PBX1P40424 430 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 KRT31Q15323 416 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 NCAPH2Q6IBW4 605 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 C12orf42Q96LP6 360 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 CTAGE1Q96RT6 745 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 DUSP9Q99956 384 aaKnown RBP18.48■□□□□ 0.55
ATG4B-225ENST00000494465 LRRC27Q9C0I9 530 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 ZHX2Q9Y6X8 837 aa18.48■□□□□ 0.55
ATG4B-225ENST00000494465 WDR90Q96KV7 1748 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 RPTORQ8N122 1335 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 RPA1P27694 616 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 TCP11X2Q5H9J9 407 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 MUM1L1Q5H9M0 696 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
ATG4B-225ENST00000494465 HAUS3Q68CZ6 603 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 SPECC1LQ69YQ0 1117 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 WNK4Q96J92 1243 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 EHMT1Q9H9B1 1298 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 POTEFA5A3E0 1075 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 POTEIP0CG38 1075 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 CEP55Q53EZ4 464 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 POTEGQ6S5H5 508 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 POTEEQ6S8J3 1075 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 SLC5A5Q92911 643 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 SLC39A2Q9NP94 309 aa18.47■□□□□ 0.55
ATG4B-225ENST00000494465 KCNJ18B7U540 433 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 EML1O00423 815 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 MEIS1O00470 390 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 VWA5AO00534 786 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 PSMD10O75832 226 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 PLA2G4BP0C869 781 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 ALAS1P13196 640 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 CCNE1P24864 410 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 KCNJ12Q14500 433 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 DLK2Q6UY11 383 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 SLC30A10Q6XR72 485 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATG4B-225ENST00000494465 P2RX5Q93086 422 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
ATG4B-225ENST00000494465 USP2O75604 605 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-225ENST00000494465 HMGCS2P54868 508 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 SLC12A3P55017 1021 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 SUPT20HL1Q3ZLR7 823 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 OTOP1Q7RTM1 612 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 ERMNQ8TAM6 284 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 ATG4CQ96DT6 458 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 ZFP91Q96JP5 570 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-225ENST00000494465 TMX1Q9H3N1 280 aa18.46■□□□□ 0.55
ATG4B-225ENST00000494465 OTOFQ9HC10 1997 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 PPP1R2P41236 205 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 PSMC6P62333 389 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 SPAG1Q07617 926 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 GOLGA8FQ08AF8 430 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 GOLGA8DPQ0D2H9 430 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 ANKRD40Q6AI12 368 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 MCF2L2Q86YR7 1114 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 PTPRFP10586 1907 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 CYP11B2P19099 503 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 ARSHQ5FYA8 562 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 REPS2Q8NFH8 660 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 SRRTQ9BXP5 876 aaKnown RBP18.45■□□□□ 0.54
ATG4B-225ENST00000494465 SEMA6BQ9H3T3 888 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 AFG3L2Q9Y4W6 797 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 STK24Q9Y6E0 443 aa18.45■□□□□ 0.54
ATG4B-225ENST00000494465 FRMPD4Q14CM0 1322 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 C19orf81C9J6K1 198 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 FDX1P10109 184 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 ARP10275 920 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 IDEP14735 1019 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 COPB1P53618 953 aaKnown RBP18.44■□□□□ 0.54
ATG4B-225ENST00000494465 PPP2R5CQ13362 524 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 CENPPQ6IPU0 288 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 IL31RAQ8NI17 732 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 SYTL5Q8TDW5 730 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-225ENST00000494465 TRIM47Q96LD4 638 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 EIF2AK1Q9BQI3 630 aaKnown RBP18.44■□□□□ 0.54
ATG4B-225ENST00000494465 POLR3CQ9BUI4 534 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-225ENST00000494465 ADAMTS5Q9UNA0 930 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 ZBED4O75132 1171 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 SSBP05455 408 aaKnown RBP eCLIP18.44■□□□□ 0.54
ATG4B-225ENST00000494465 ITGB5P18084 799 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 COASYQ13057 564 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 PSMD2Q13200 908 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 LRCH2Q5VUJ6 765 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 TC2NQ8N9U0 490 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 GLIS3Q8NEA6 775 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 MXRA8Q9BRK3 442 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 KCND1Q9NSA2 647 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 TAB2Q9NYJ8 693 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 RABGAP1Q9Y3P9 1069 aa18.44■□□□□ 0.54
ATG4B-225ENST00000494465 NPHP3-ACAD11A0A0J9YXS1 232 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 BICDL2A1A5D9 508 aa18.43■□□□□ 0.54
ATG4B-225ENST00000494465 USP27XA6NNY8 438 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms