RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 SEZ6LQ9BYH1 1024 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 PPP1R12CQ9BZL4 782 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 GTF3C3Q9Y5Q9 886 aa25.13■■□□□ 1.61
HPS3-207ENST00000494327 B4GALT4O60513 344 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 EIF5BO60841 1220 aaKnown RBP25.12■■□□□ 1.61
HPS3-207ENST00000494327 SEC24BO95487 1268 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 TIMP1P01033 207 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 MYSM1Q5VVJ2 828 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 XRRA1Q6P2D8 792 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 NLRX1Q86UT6 975 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 EMID1Q96A84 441 aaPredicted RBP25.12■■□□□ 1.61
HPS3-207ENST00000494327 PGBD1Q96JS3 809 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 ALDH8A1Q9H2A2 487 aaPredicted RBP25.12■■□□□ 1.61
HPS3-207ENST00000494327 NID2Q14112 1375 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 KIAA1217Q5T5P2 1943 aa25.12■■□□□ 1.61
HPS3-207ENST00000494327 SPATA31C2B4DYI2 1134 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 FIBPO43427 364 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 ANAPC15P60006 121 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 NTRK3Q16288 839 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 PPTC7Q8NI37 304 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 BCAS3Q9H6U6 928 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 EHMT1Q9H9B1 1298 aa25.11■■□□□ 1.61
HPS3-207ENST00000494327 TRMT13Q9NUP7 481 aaKnown RBP25.11■■□□□ 1.61
HPS3-207ENST00000494327 ICAM3P32942 547 aa25.1■■□□□ 1.61
HPS3-207ENST00000494327 SEMA3FQ13275 785 aa25.1■■□□□ 1.61
HPS3-207ENST00000494327 PKN1Q16512 942 aa25.1■■□□□ 1.61
HPS3-207ENST00000494327 HSDL1Q3SXM5 330 aa25.1■■□□□ 1.61
HPS3-207ENST00000494327 ZNF274Q96GC6 653 aaPredicted RBP25.1■■□□□ 1.61
HPS3-207ENST00000494327 TMEM260Q9NX78 707 aa25.1■■□□□ 1.61
HPS3-207ENST00000494327 CPLX1O14810 134 aa25.09■■□□□ 1.61
HPS3-207ENST00000494327 IFNAR1P17181 557 aa25.09■■□□□ 1.61
HPS3-207ENST00000494327 FPGSQ05932 587 aa25.09■■□□□ 1.61
HPS3-207ENST00000494327 CYFIP1Q7L576 1253 aa25.09■■□□□ 1.61
HPS3-207ENST00000494327 RNF26Q9BY78 433 aaPredicted RBP25.09■■□□□ 1.61
HPS3-207ENST00000494327 GLT8D2Q9H1C3 349 aa25.09■■□□□ 1.61
HPS3-207ENST00000494327 LTBP2Q14767 1821 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 SOX1O00570 391 aaPredicted RBP25.08■■□□□ 1.61
HPS3-207ENST00000494327 ZNF286BP0CG31 522 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 CYP2C18P33260 490 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 NEDD9Q14511 834 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 SHHQ15465 462 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 JAKMIP3Q5VZ66 844 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 MFSD5Q6N075 450 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 NFRKBQ6P4R8 1299 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 KAT2BQ92831 832 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 ALG1Q9BT22 464 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 ANO3Q9BYT9 981 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 HIPK3Q9H422 1215 aa25.08■■□□□ 1.61
HPS3-207ENST00000494327 NOP56O00567 594 aaKnown RBP25.07■■□□□ 1.6
HPS3-207ENST00000494327 PPFIA4O75335 1185 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 FOSP01100 380 aaPredicted RBP25.07■■□□□ 1.6
HPS3-207ENST00000494327 SUPT20HL2P0C7V6 817 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 CYP2C9P11712 490 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 ITGB5P18084 799 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 EPHB4P54760 987 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 SP4Q02446 784 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 SSRP1Q08945 709 aaKnown RBP25.07■■□□□ 1.6
HPS3-207ENST00000494327 C9orf50Q5SZB4 431 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 CCDC12Q8WUD4 166 aaPredicted RBP25.07■■□□□ 1.6
HPS3-207ENST00000494327 C6orf50Q9HD87 102 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 PKD2L1Q9P0L9 805 aa25.07■■□□□ 1.6
HPS3-207ENST00000494327 PSEN2P49810 448 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 TRIM22Q8IYM9 498 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 TMEM199Q8N511 208 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 GPRASP2Q96D09 838 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 LRCH3Q96II8 777 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 NOD1Q9Y239 953 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 UBIAD1Q9Y5Z9 338 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 UMODL1Q5DID0 1318 aa25.06■■□□□ 1.6
HPS3-207ENST00000494327 TRIOBPQ9H2D6 2365 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 CSF2RAP15509 400 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 CCL23P55773 120 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 PTPN11Q06124 597 aaPredicted RBP25.05■■□□□ 1.6
HPS3-207ENST00000494327 MTMR1Q13613 665 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 MFSD10Q14728 455 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 CPLX2Q6PUV4 134 aaKnown RBP25.05■■□□□ 1.6
HPS3-207ENST00000494327 METTL7BQ6UX53 244 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 TEX2Q8IWB9 1127 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 NOC4LQ9BVI4 516 aaKnown RBP25.05■■□□□ 1.6
HPS3-207ENST00000494327 KATNAL1Q9BW62 490 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 ZMYND12Q9H0C1 365 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 JADE2Q9NQC1 790 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 VPS54Q9P1Q0 977 aa25.05■■□□□ 1.6
HPS3-207ENST00000494327 ADAMTS3O15072 1205 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 ATP9AO75110 1047 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 CLK2P49760 499 aaKnown RBP25.04■■□□□ 1.6
HPS3-207ENST00000494327 AK2P54819 239 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 AP3B2Q13367 1082 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 KIAA0753Q2KHM9 967 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 LRIT3Q3SXY7 679 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 C7orf31Q8N865 590 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 CDHR1Q96JP9 859 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 SENP7Q9BQF6 1050 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 SLKQ9H2G2 1235 aaPredicted RBP25.04■■□□□ 1.6
HPS3-207ENST00000494327 TPCN1Q9ULQ1 816 aa25.04■■□□□ 1.6
HPS3-207ENST00000494327 ESYT2A0FGR8 921 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 F2P00734 622 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 HOXD8P13378 290 aaPredicted RBP25.03■■□□□ 1.6
HPS3-207ENST00000494327 GNA11P29992 359 aa25.03■■□□□ 1.6
HPS3-207ENST00000494327 ZNF76P36508 570 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms