RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PKD2L1Q9P0L9 805 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 PCDHA6Q9UN73 950 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 PCDHA8Q9Y5H6 950 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 LAMA3Q16787 3333 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 TANC1Q9C0D5 1861 aa16.88■□□□□ 0.29
ATG4B-224ENST00000494132 SMCO2A6NFE2 343 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 DTNBO60941 627 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 SCG2P13521 617 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 ADCY7P51828 1080 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 NTRK3Q16288 839 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 PKN1Q16512 942 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-224ENST00000494132 HSDL1Q3SXM5 330 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 CELF3Q5SZQ8 465 aaKnown RBP16.87■□□□□ 0.29
ATG4B-224ENST00000494132 MYSM1Q5VVJ2 828 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 PCNX4Q63HM2 1172 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 SPATA33Q96N06 139 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 INPP4AQ96PE3 977 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-224ENST00000494132 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 SLC26A6Q9BXS9 759 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-224ENST00000494132 BARHL2Q9NY43 387 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 TELO2Q9Y4R8 837 aa16.87■□□□□ 0.29
ATG4B-224ENST00000494132 TIMP1P01033 207 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 CYP2C9P11712 490 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 CYP2C18P33260 490 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 EVCP57679 992 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 SP4Q02446 784 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 FPGSQ05932 587 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 SHHQ15465 462 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 GNPTABQ3T906 1256 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 PPP1R18Q6NYC8 613 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 KCNV1Q6PIU1 500 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 KAT2BQ92831 832 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 MLXIPQ9HAP2 919 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 RIC8AQ9NPQ8 531 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 GBF1Q92538 1859 aa16.86■□□□□ 0.29
ATG4B-224ENST00000494132 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 PRPF3O43395 683 aaKnown RBP16.85■□□□□ 0.29
ATG4B-224ENST00000494132 FIBPO43427 364 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 KPNA6O60684 536 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 DGKDQ16760 1214 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 JAKMIP3Q5VZ66 844 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 CYFIP1Q7L576 1253 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 PPTC7Q8NI37 304 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 EMID1Q96A84 441 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-224ENST00000494132 ANO3Q9BYT9 981 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 TET1Q8NFU7 2136 aa16.85■□□□□ 0.29
ATG4B-224ENST00000494132 SZT2Q5T011 3432 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 SPATA31C2B4DYI2 1134 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 hCG_1984214I3L0E3 225 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 STAM2O75886 525 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 ACRP10323 421 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 CSF2RAP15509 400 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 ITGB5P18084 799 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 ICAM3P32942 547 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 CCL23P55773 120 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 AKAP17AQ02040 695 aaKnown RBP16.84■□□□□ 0.29
ATG4B-224ENST00000494132 MFSD5Q6N075 450 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 NLRX1Q86UT6 975 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 ZNF713Q8N859 430 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-224ENST00000494132 HIPK3Q9H422 1215 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 VPS54Q9P1Q0 977 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 WDR81Q562E7 1941 aa16.84■□□□□ 0.29
ATG4B-224ENST00000494132 ATP9AO75110 1047 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 TGFB3P10600 412 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 IFNAR1P17181 557 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 PSEN2P49810 448 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 MFSD10Q14728 455 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 KIAA0753Q2KHM9 967 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 CYP2W1Q8TAV3 490 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 RASGRP4Q8TDF6 673 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 SCLYQ96I15 445 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
ATG4B-224ENST00000494132 RNF26Q9BY78 433 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-224ENST00000494132 WNT8AQ9H1J5 351 aa16.83■□□□□ 0.28
ATG4B-224ENST00000494132 NOP56O00567 594 aaKnown RBP16.82■□□□□ 0.28
ATG4B-224ENST00000494132 CPLX1O14810 134 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 CLK2P49760 499 aaKnown RBP16.82■□□□□ 0.28
ATG4B-224ENST00000494132 AK2P54819 239 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 ANAPC15P60006 121 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 NEDD9Q14511 834 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 GDF6Q6KF10 455 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-224ENST00000494132 XRRA1Q6P2D8 792 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 NFRKBQ6P4R8 1299 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 ZNF274Q96GC6 653 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-224ENST00000494132 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 HDAC6Q9UBN7 1215 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 TPCN1Q9ULQ1 816 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 UBIAD1Q9Y5Z9 338 aa16.82■□□□□ 0.28
ATG4B-224ENST00000494132 F2P00734 622 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 LGALS2P05162 132 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 HOXD8P13378 290 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-224ENST00000494132 SCRN1Q12765 414 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 MTMR1Q13613 665 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 PTGISQ16647 500 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 LRIT3Q3SXY7 679 aa16.81■□□□□ 0.28
ATG4B-224ENST00000494132 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms