RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ALDH8A1Q9H2A2 487 aaPredicted RBP25.97■■□□□ 1.75
SNIP1-203ENST00000493916 PDRG1Q9NUG6 133 aa25.97■■□□□ 1.75
SNIP1-203ENST00000493916 SPATA31C2B4DYI2 1134 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 FIBPO43427 364 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 B4GALT4O60513 344 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 SLC34A2O95436 690 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 GGPS1O95749 300 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 IFNAR1P17181 557 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 ZNF274Q96GC6 653 aaPredicted RBP25.96■■□□□ 1.75
SNIP1-203ENST00000493916 EHMT1Q9H9B1 1298 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 PCDHA6Q9UN73 950 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 PCDHA8Q9Y5H6 950 aa25.96■■□□□ 1.75
SNIP1-203ENST00000493916 PTPN11Q06124 597 aaPredicted RBP25.95■■□□□ 1.74
SNIP1-203ENST00000493916 SEMA3FQ13275 785 aa25.95■■□□□ 1.74
SNIP1-203ENST00000493916 PKN1Q16512 942 aa25.95■■□□□ 1.74
SNIP1-203ENST00000493916 NBPF20Q3BBV1 942 aa25.95■■□□□ 1.74
SNIP1-203ENST00000493916 LRIT3Q3SXY7 679 aa25.95■■□□□ 1.74
SNIP1-203ENST00000493916 RNF26Q9BY78 433 aaPredicted RBP25.95■■□□□ 1.74
SNIP1-203ENST00000493916 TRPV6Q9H1D0 765 aa25.95■■□□□ 1.74
SNIP1-203ENST00000493916 NCOA5Q9HCD5 579 aaKnown RBP25.95■■□□□ 1.74
SNIP1-203ENST00000493916 RTEL1Q9NZ71 1219 aa25.95■■□□□ 1.74
SNIP1-203ENST00000493916 ESYT2A0FGR8 921 aa25.94■■□□□ 1.74
SNIP1-203ENST00000493916 SMCO2A6NFE2 343 aa25.94■■□□□ 1.74
SNIP1-203ENST00000493916 FOSP01100 380 aaPredicted RBP25.94■■□□□ 1.74
SNIP1-203ENST00000493916 CCT2P78371 535 aaKnown RBP25.94■■□□□ 1.74
SNIP1-203ENST00000493916 NLRX1Q86UT6 975 aa25.94■■□□□ 1.74
SNIP1-203ENST00000493916 KAT2BQ92831 832 aa25.94■■□□□ 1.74
SNIP1-203ENST00000493916 PHKBQ93100 1093 aa25.94■■□□□ 1.74
SNIP1-203ENST00000493916 SPATA33Q96N06 139 aa25.94■■□□□ 1.74
SNIP1-203ENST00000493916 SUPT20HL2P0C7V6 817 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 CLK2P49760 499 aaKnown RBP25.93■■□□□ 1.74
SNIP1-203ENST00000493916 AKAP17AQ02040 695 aaKnown RBP25.93■■□□□ 1.74
SNIP1-203ENST00000493916 FPGSQ05932 587 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 AP3B2Q13367 1082 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 NEDD9Q14511 834 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 HSDL1Q3SXM5 330 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 MFSD5Q6N075 450 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 CCDC12Q8WUD4 166 aaPredicted RBP25.93■■□□□ 1.74
SNIP1-203ENST00000493916 GPRASP2Q96D09 838 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 SENP7Q9BQF6 1050 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 MLXIPQ9HAP2 919 aa25.93■■□□□ 1.74
SNIP1-203ENST00000493916 PPFIA4O75335 1185 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 F2P00734 622 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 METTL7BQ6UX53 244 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 SESTD1Q86VW0 696 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 CDHR1Q96JP9 859 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 KATNAL1Q9BW62 490 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 ZMYND12Q9H0C1 365 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 HIPK3Q9H422 1215 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 UBIAD1Q9Y5Z9 338 aa25.92■■□□□ 1.74
SNIP1-203ENST00000493916 ITGB5P18084 799 aa25.91■■□□□ 1.74
SNIP1-203ENST00000493916 NOC4LQ9BVI4 516 aaKnown RBP25.91■■□□□ 1.74
SNIP1-203ENST00000493916 SLC26A6Q9BXS9 759 aa25.91■■□□□ 1.74
SNIP1-203ENST00000493916 ANO3Q9BYT9 981 aa25.91■■□□□ 1.74
SNIP1-203ENST00000493916 TRMT13Q9NUP7 481 aaKnown RBP25.91■■□□□ 1.74
SNIP1-203ENST00000493916 SOX1O00570 391 aaPredicted RBP25.9■■□□□ 1.74
SNIP1-203ENST00000493916 SORBS3O60504 671 aa25.9■■□□□ 1.74
SNIP1-203ENST00000493916 SEC24BO95487 1268 aa25.9■■□□□ 1.74
SNIP1-203ENST00000493916 FAM47CQ5HY64 1035 aa25.9■■□□□ 1.74
SNIP1-203ENST00000493916 LARP6Q9BRS8 491 aaKnown RBP25.9■■□□□ 1.74
SNIP1-203ENST00000493916 PPP1R12CQ9BZL4 782 aa25.9■■□□□ 1.74
SNIP1-203ENST00000493916 MYH7BA7E2Y1 1941 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 HAS3O00219 553 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 ZNF286BP0CG31 522 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 EPHB4P54760 987 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 CYFIP1Q7L576 1253 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 TRIM22Q8IYM9 498 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 TMEM199Q8N511 208 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 GIMAP8Q8ND71 665 aaPredicted RBP25.89■■□□□ 1.74
SNIP1-203ENST00000493916 BCAS3Q9H6U6 928 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 C6orf50Q9HD87 102 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 JADE2Q9NQC1 790 aa25.89■■□□□ 1.74
SNIP1-203ENST00000493916 SZT2Q5T011 3432 aa25.89■■□□□ 1.73
SNIP1-203ENST00000493916 CPLX1O14810 134 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 CYP2C18P33260 490 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 SREBF1P36956 1147 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 PSEN2P49810 448 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 PPIGQ13427 754 aaKnown RBP eCLIP25.88■■□□□ 1.73
SNIP1-203ENST00000493916 MTMR1Q13613 665 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 MFSD10Q14728 455 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 ANKRD1Q15327 319 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 SHHQ15465 462 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 C9orf50Q5SZB4 431 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 MCTP2Q6DN12 878 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 CCDC148Q8NFR7 591 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 PGBD1Q96JS3 809 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 TMEM260Q9NX78 707 aa25.88■■□□□ 1.73
SNIP1-203ENST00000493916 LAMA2P24043 3122 aaKnown RBP25.88■■□□□ 1.73
SNIP1-203ENST00000493916 NOP56O00567 594 aaKnown RBP25.87■■□□□ 1.73
SNIP1-203ENST00000493916 MAFGO15525 162 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 PPFIA3O75145 1194 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 KCNA2P16389 499 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 GNA11P29992 359 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 SSRP1Q08945 709 aaKnown RBP25.87■■□□□ 1.73
SNIP1-203ENST00000493916 CPLX2Q6PUV4 134 aaKnown RBP25.87■■□□□ 1.73
SNIP1-203ENST00000493916 PPP1R13LQ8WUF5 828 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 GPR20Q99678 358 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 SH3GLB2Q9NR46 395 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 UMODL1Q5DID0 1318 aa25.87■■□□□ 1.73
SNIP1-203ENST00000493916 CSF2RAP15509 400 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms