RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SSRP1Q08945 709 aaKnown RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 FAAP100Q0VG06 881 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 NEDD9Q14511 834 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 DGKDQ16760 1214 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 UBE2SQ16763 222 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 CELF3Q5SZQ8 465 aaKnown RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 MCTP2Q6DN12 878 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 SH3RF1Q7Z6J0 888 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 SLC43A3Q8NBI5 491 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 IL31RAQ8NI17 732 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 AFG1LQ8WV93 481 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 PHKBQ93100 1093 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 TRIM43Q96BQ3 446 aaPredicted RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 CDHR1Q96JP9 859 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 INPP4AQ96PE3 977 aaPredicted RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 SLC26A6Q9BXS9 759 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 RNF26Q9BY78 433 aaPredicted RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 C6orf50Q9HD87 102 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 PDLIM7Q9NR12 457 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 MKI67P46013 3256 aaKnown RBP8□□□□□ -1.13
TOP3A-207ENST00000493648 FRMPD4Q14CM0 1322 aa8□□□□□ -1.13
TOP3A-207ENST00000493648 NID2Q14112 1375 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 MAFGO15525 162 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 PPFIA4O75335 1185 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 CDKL5O76039 1030 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 GGPS1O95749 300 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 TIMP1P01033 207 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 MMP3P08254 477 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 SUPT20HL2P0C7V6 817 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 GNA11P29992 359 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 NEK4P51957 841 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 PSMC6P62333 389 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 SP2Q02086 613 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 PTPN11Q06124 597 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-207ENST00000493648 STK3Q13188 491 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 MKRN4PQ13434 485 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-207ENST00000493648 NTRK3Q16288 839 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 PKN1Q16512 942 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 MYSM1Q5VVJ2 828 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 TYW1BQ6NUM6 668 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 FAM126BQ8IXS8 530 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 GIMAP8Q8ND71 665 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-207ENST00000493648 PPTC7Q8NI37 304 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 BADQ92934 168 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 GPRASP2Q96D09 838 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 IL17RAQ96F46 866 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 SPATA33Q96N06 139 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 LARP6Q9BRS8 491 aaKnown RBP7.99□□□□□ -1.13
TOP3A-207ENST00000493648 KATNAL1Q9BW62 490 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 ZMYND12Q9H0C1 365 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 SLKQ9H2G2 1235 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-207ENST00000493648 PRO3102Q9H379 93 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 NCOA5Q9HCD5 579 aaKnown RBP7.99□□□□□ -1.13
TOP3A-207ENST00000493648 SH3GLB2Q9NR46 395 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 GRIN2DO15399 1336 aa7.99□□□□□ -1.13
TOP3A-207ENST00000493648 ESYT2A0FGR8 921 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 NOP56O00567 594 aaKnown RBP7.98□□□□□ -1.13
TOP3A-207ENST00000493648 SORBS3O60504 671 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 GABBR2O75899 941 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 DEXIO95424 95 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 CD4P01730 458 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 UBA1P22314 1058 aaKnown RBP7.98□□□□□ -1.13
TOP3A-207ENST00000493648 ZNF76P36508 570 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 AK2P54819 239 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 NLRP5P59047 1200 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 CHMP4BP1P59074 171 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 AP3B2Q13367 1082 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 MTMR1Q13613 665 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 FAM47CQ5HY64 1035 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 NFRKBQ6P4R8 1299 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 CYFIP1Q7L576 1253 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 TDHQ8IZJ6 230 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 TMEM199Q8N511 208 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 CCDC148Q8NFR7 591 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 SENP7Q9BQF6 1050 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 ANO3Q9BYT9 981 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 TRPV6Q9H1D0 765 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 JADE2Q9NQC1 790 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 UBIAD1Q9Y5Z9 338 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 CEP290O15078 2479 aa7.98□□□□□ -1.13
TOP3A-207ENST00000493648 B4GALT4O60513 344 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 PFKFB2O60825 505 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 PPFIA3O75145 1194 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 XBP1P17861 261 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 ITGB5P18084 799 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
TOP3A-207ENST00000493648 PSEN2P49810 448 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 FPGSQ05932 587 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 SCRN1Q12765 414 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 HSDL1Q3SXM5 330 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 C8orf34Q49A92 452 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 JAKMIP3Q5VZ66 844 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 MFSD5Q6N075 450 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 METTL7BQ6UX53 244 aa7.97□□□□□ -1.13
TOP3A-207ENST00000493648 FAM177A1Q8N128 213 aaPredicted RBP7.97□□□□□ -1.13
TOP3A-207ENST00000493648 REXO1Q8N1G1 1221 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms