RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 SAPCD2Q86UD0 394 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 ADGRG2Q8IZP9 1017 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 TTC9BQ8N6N2 239 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 NLGN2Q8NFZ4 835 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 ASB16Q96NS5 453 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 C1QTNF3Q9BXJ4 246 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 MTFR1LQ9H019 292 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 ERVK13-1Q9NX77 482 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 GNEQ9Y223 722 aaKnown RBP6.25□□□□□ -1.41
CLIP4-212ENST00000493551 TLR6Q9Y2C9 796 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 LMO7Q8WWI1 1683 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 PARP4Q9UKK3 1724 aaKnown RBP6.25□□□□□ -1.41
CLIP4-212ENST00000493551 CRB1P82279 1406 aa6.25□□□□□ -1.41
CLIP4-212ENST00000493551 HTR3BO95264 441 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
CLIP4-212ENST00000493551 PDE4CQ08493 712 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 NBPF9Q3BBW0 867 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 RBM15Q96T37 977 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLIP4-212ENST00000493551 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 DUSP10Q9Y6W6 482 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 PMF1-BGLAPU3KQ54 211 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 ITSN1Q15811 1721 aa6.24□□□□□ -1.41
CLIP4-212ENST00000493551 SBF2Q86WG5 1849 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 RGS13O14921 159 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 PLSCR1O15162 318 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 PRAMEF1O95521 474 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 LDHBP07195 334 aaKnown RBP6.23□□□□□ -1.41
CLIP4-212ENST00000493551 ZNF20P17024 532 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 GJA9P57773 515 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 HTRA3P83110 453 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 FOXO4P98177 505 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 DDX1Q92499 740 aaKnown RBP6.23□□□□□ -1.41
CLIP4-212ENST00000493551 MENTQ9BUN1 341 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 LNPKQ9C0E8 428 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 IMPACTQ9P2X3 320 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 THRAP3Q9Y2W1 955 aaKnown RBP6.23□□□□□ -1.41
CLIP4-212ENST00000493551 USP19O94966 1318 aa6.23□□□□□ -1.41
CLIP4-212ENST00000493551 ARHGEF28Q8N1W1 1705 aaKnown RBP6.22□□□□□ -1.41
CLIP4-212ENST00000493551 SHANK3Q9BYB0 1731 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 CPDO75976 1380 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 FAM221AA4D161 298 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 SIGLEC6O43699 453 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 NOBOXO60393 691 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 FBLN1P23142 703 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 GDF5P43026 501 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 SNW1Q13573 536 aaKnown RBP6.22□□□□□ -1.41
CLIP4-212ENST00000493551 BNC2Q6ZN30 1099 aaPredicted RBP6.22□□□□□ -1.41
CLIP4-212ENST00000493551 PHC3Q8NDX5 983 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 GATAD2BQ8WXI9 593 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 SAMD11Q96NU1 681 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.22□□□□□ -1.41
CLIP4-212ENST00000493551 FAN1Q9Y2M0 1017 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 AK5Q9Y6K8 562 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 PPIP5K1Q6PFW1 1433 aa6.22□□□□□ -1.41
CLIP4-212ENST00000493551 AKAP12Q02952 1782 aa6.21□□□□□ -1.41
CLIP4-212ENST00000493551 CHD4Q14839 1912 aa6.21□□□□□ -1.41
CLIP4-212ENST00000493551 TOPAZ1Q8N9V7 1692 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 DNAJA2O60884 412 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
CLIP4-212ENST00000493551 C6P13671 934 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 NOC4LQ9BVI4 516 aaKnown RBP6.21□□□□□ -1.42
CLIP4-212ENST00000493551 CDADC1Q9BWV3 514 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 PRDM14Q9GZV8 571 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 SCAND2PQ9GZW5 306 aaPredicted RBP6.21□□□□□ -1.42
CLIP4-212ENST00000493551 RNF38Q9H0F5 515 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 ATP10DQ9P241 1426 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 RGPD3A6NKT7 1758 aaPredicted RBP6.21□□□□□ -1.42
CLIP4-212ENST00000493551 RGPD4Q7Z3J3 1758 aa6.21□□□□□ -1.42
CLIP4-212ENST00000493551 WNK3Q9BYP7 1800 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 POLR3AO14802 1390 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-212ENST00000493551 EXOC5O00471 708 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 TACR2P21452 398 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 POLD1P28340 1107 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 NBPF12Q5TAG4 269 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-212ENST00000493551 CARFQ8N187 725 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 LOXL4Q96JB6 756 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 MRIQ9BWK5 157 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
CLIP4-212ENST00000493551 WDR17Q8IZU2 1322 aa6.2□□□□□ -1.42
CLIP4-212ENST00000493551 AATKQ6ZMQ8 1374 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 RGPD5Q99666 1765 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 CPSF1Q10570 1443 aaKnown RBP6.19□□□□□ -1.42
CLIP4-212ENST00000493551 A0A1W2PQ27 194 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 A0A1W2PQ64 194 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 A0A1W2PQC6 194 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 A0A1W2PQD8 194 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 SRGAP3O43295 1099 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 UBOX5O94941 541 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 ZNF205O95201 554 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 F13A1P00488 732 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 CYBBP04839 570 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 BMP8BP34820 402 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 LMNB2Q03252 620 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 DLX2Q07687 328 aaPredicted RBP6.19□□□□□ -1.42
CLIP4-212ENST00000493551 PAQR3Q6TCH7 311 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 JMJD8Q96S16 334 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 SLITRK6Q9H5Y7 841 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 CHST7Q9NS84 486 aa6.19□□□□□ -1.42
CLIP4-212ENST00000493551 TFCP2L1Q9NZI6 479 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms