RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NKX3-2P78367 333 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 PUM1Q14671 1186 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTCD3-218ENST00000493430 CHRNA2Q15822 529 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 MCTP2Q6DN12 878 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 ZNF227Q86WZ6 799 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 CCDC103Q8IW40 242 aa5.25□□□□□ -1.57
PTCD3-218ENST00000493430 TMEFF2Q9UIK5 374 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-218ENST00000493430 UNCXA6NJT0 531 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 ARNTLO00327 626 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 DDX3XO00571 662 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCD3-218ENST00000493430 HGSO14964 777 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-218ENST00000493430 SUSD5O60279 629 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 DDAH1O94760 285 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 LTBRP36941 435 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 STAT5AP42229 794 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 LSAMPQ13449 338 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 TBC1D10BQ4KMP7 808 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-218ENST00000493430 ACBD5Q5T8D3 534 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-218ENST00000493430 TXNDC5Q8NBS9 432 aaKnown RBP5.24□□□□□ -1.57
PTCD3-218ENST00000493430 KREMEN2Q8NCW0 462 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 RCBTB1Q8NDN9 531 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 CHAMP1Q96JM3 812 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 SAMD11Q96NU1 681 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 INVSQ9Y283 1065 aa5.24□□□□□ -1.57
PTCD3-218ENST00000493430 WDR62O43379 1518 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 H7BY64 318 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 ADAM17P78536 824 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 TESK1Q15569 626 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 SF1Q15637 639 aaKnown RBP5.23□□□□□ -1.57
PTCD3-218ENST00000493430 FXNQ16595 210 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 CR1LQ2VPA4 569 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 PRR31Q5SQ13 230 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 PRAMEF18Q5VWM3 479 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 NLRP10Q86W26 655 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 PPIL6Q8IXY8 311 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 TOE1Q96GM8 510 aaKnown RBP5.23□□□□□ -1.57
PTCD3-218ENST00000493430 LOXL4Q96JB6 756 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 LCORQ96JN0 433 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-218ENST00000493430 TMPRSS5Q9H3S3 457 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 ZNF652Q9Y2D9 606 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 PCDHA2Q9Y5H9 948 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 CUX2O14529 1486 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 URB2Q14146 1524 aaKnown RBP5.23□□□□□ -1.57
PTCD3-218ENST00000493430 ZNF536O15090 1300 aa5.23□□□□□ -1.57
PTCD3-218ENST00000493430 C9orf118A6NHY6 69 aa5.22□□□□□ -1.57
PTCD3-218ENST00000493430 B2RBV5 119 aa5.22□□□□□ -1.57
PTCD3-218ENST00000493430 GNL2Q13823 731 aaKnown RBP5.22□□□□□ -1.57
PTCD3-218ENST00000493430 PRSS53Q2L4Q9 553 aa5.22□□□□□ -1.57
PTCD3-218ENST00000493430 STEAP3Q658P3 488 aa5.22□□□□□ -1.57
PTCD3-218ENST00000493430 TTC9BQ8N6N2 239 aa5.22□□□□□ -1.57
PTCD3-218ENST00000493430 PRKAG3Q9UGI9 489 aa5.22□□□□□ -1.57
PTCD3-218ENST00000493430 MRC2Q9UBG0 1479 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 CYP7B1O75881 506 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 DGKIO75912 1065 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 CYP1A1P04798 512 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-218ENST00000493430 ERCC5P28715 1186 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-218ENST00000493430 GFRA1P56159 465 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 ADAM9Q13443 819 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 SURF1Q15526 300 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 CPZQ66K79 652 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 GLB1LQ6UWU2 654 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 TMEM145Q8NBT3 493 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 ARRDC4Q8NCT1 418 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 CLIC6Q96NY7 704 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 EPN3Q9H201 632 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 L2HGDHQ9H9P8 463 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 CLDND1Q9NY35 253 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 DTLQ9NZJ0 730 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 FBXL7Q9UJT9 491 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 PCDHB4Q9Y5E5 795 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 WDR97A6NE52 1622 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 PBRM1Q86U86 1689 aa5.21□□□□□ -1.58
PTCD3-218ENST00000493430 EIF4G3O43432 1585 aaKnown RBP5.21□□□□□ -1.58
PTCD3-218ENST00000493430 CCDC88BA6NC98 1476 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 CEP164Q9UPV0 1460 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 TCRBV5S2A0A599 114 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 AGRPO00253 132 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 TADA3O75528 432 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 LCP1P13796 627 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 IL13P35225 146 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 ETFBP38117 255 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 EMC4Q5J8M3 183 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 DENND5AQ6IQ26 1287 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 TEPPQ6URK8 271 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 EEPD1Q7L9B9 569 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 CHST13Q8NET6 341 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 MICAL1Q8TDZ2 1067 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTCD3-218ENST00000493430 C8orf49Q96NF6 230 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.581e-13■■■□□ 15.1
PTCD3-218ENST00000493430 C1QTNF3Q9BXJ4 246 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 EPB41L1Q9H4G0 881 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 FANCD2Q9BXW9 1451 aa5.2□□□□□ -1.58
PTCD3-218ENST00000493430 MAFKO60675 156 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 ZNF20P17024 532 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 ZNF28P17035 718 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 MRM1Q6IN84 353 aaKnown RBP5.19□□□□□ -1.58
PTCD3-218ENST00000493430 PLEKHH3Q7Z736 793 aa5.19□□□□□ -1.58
PTCD3-218ENST00000493430 PHOSPHO1Q8TCT1 267 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms