RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 STAMBPL1Q96FJ0 436 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 SLITRK6Q9H5Y7 841 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 KIF9Q9HAQ2 790 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 KBTBD4Q9NVX7 518 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 CPSF2Q9P2I0 782 aaKnown RBP7.42□□□□□ -1.22
EWSR1-220ENST00000493426 CNOT7Q9UIV1 285 aaKnown RBP7.42□□□□□ -1.22
EWSR1-220ENST00000493426 TTC7AQ9ULT0 858 aaPredicted RBP7.42□□□□□ -1.22
EWSR1-220ENST00000493426 KCNJ14Q9UNX9 436 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 ASB3Q9Y575 518 aa7.42□□□□□ -1.22
EWSR1-220ENST00000493426 KIF1AQ12756 1690 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 PPFIA2O75334 1257 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 MOCS3O95396 460 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 FGFR1OPO95684 399 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 BAG3O95817 575 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 CSF1RP07333 972 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 LINGO3P0C6S8 592 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 PCP11498 1178 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 NQO1P15559 274 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 GNAT2P19087 354 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 EIF4A3P38919 411 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 MMP13P45452 471 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 CYP27A1Q02318 531 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 BNIP1Q12981 228 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 PPP1R7Q15435 360 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 ZC3H12AQ5D1E8 599 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 SLC30A9Q6PML9 568 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 COL23A1Q86Y22 540 aaPredicted RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 DHX37Q8IY37 1157 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 GALNT15Q8N3T1 639 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 NKX2-3Q8TAU0 364 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 OXER1Q8TDS5 423 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 LPIN2Q92539 896 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 BAP1Q92560 729 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 P2RX5Q93086 422 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 BICD1Q96G01 975 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 ZNF570Q96NI8 536 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 RNF41Q9H4P4 317 aaPredicted RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 SLC52A2Q9HAB3 445 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 MLXIPQ9HAP2 919 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 FAM114A2Q9NRY5 505 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 VPS54Q9P1Q0 977 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 CNOT8Q9UFF9 292 aaKnown RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 AFF2P51816 1311 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 PNPLA7Q6ZV29 1317 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 DCCP43146 1447 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 PXDNQ92626 1479 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 COL22A1Q8NFW1 1626 aaPredicted RBP7.41□□□□□ -1.22
EWSR1-220ENST00000493426 TIAM2Q8IVF5 1701 aa7.41□□□□□ -1.22
EWSR1-220ENST00000493426 EME2A4GXA9 379 aaPredicted RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 B4DLN1 442 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 O00370 1275 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 LAD1O00515 517 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 AKR1B10O60218 316 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 OAS1P00973 400 aaKnown RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 RPSAP08865 295 aaKnown RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 UQCRFS1P1P0C7P4 283 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CALM1P0DP23 149 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CALM2P0DP24 149 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CALM3P0DP25 149 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 ZBTB48P10074 688 aaPredicted RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 ZAP70P43403 619 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 NT5C2P49902 561 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 PAPOLAP51003 745 aaKnown RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 USP11P51784 963 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 MRPS35P82673 323 aaKnown RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 MYO1EQ12965 1108 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 PTGDRQ13258 359 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 WTAPQ15007 396 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 SEC23AQ15436 765 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 NPY5RQ15761 445 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 PARP6Q2NL67 630 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CCDC57Q2TAC2 916 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 VWA3BQ502W6 1294 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 LRRC24Q50LG9 513 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 NAALADL2Q58DX5 795 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 HGSNATQ68CP4 663 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CENPPQ6IPU0 288 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CNNM4Q6P4Q7 775 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 PDXDC1Q6P996 788 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 ASRGL1Q7L266 308 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 TRPM8Q7Z2W7 1104 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 HOOK3Q86VS8 718 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 SESTD1Q86VW0 696 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 RASGEF1CQ8N431 466 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 CSGALNACT2Q8N6G5 542 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 AGAP11Q8TF27 550 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 ATXN2LQ8WWM7 1075 aaKnown RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 TBC1D31Q96DN5 1066 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 DTNBP1Q96EV8 351 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 LTV1Q96GA3 475 aaPredicted RBP7.4□□□□□ -1.22
EWSR1-220ENST00000493426 IFT74Q96LB3 600 aa7.4□□□□□ -1.22
EWSR1-220ENST00000493426 C7orf25Q9BPX7 421 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms